C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15800
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119892 Gm15800-001 ENSMUSG00000042744 10090 + 5:121220219-121368577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119892 1.064±0.13 1.950±0.47 1.334±0.00 2.998±0.83 1.921±0.24 3.102±1.46 1.861±1.13 1.818±1.15 2.453±2.98 1.636±0.47 0.571±0.41 2.345±0.72 1.010±0.36 7.157±4.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000108874 CU459012.3-201 protein_coding Danio_rerio 0 1354
ENST00000311694 HECTD4-002 retained_intron Homo_sapiens 0 2702
ENST00000377560 HECTD4-001 protein_coding Homo_sapiens 0 16340
ENST00000547519 HECTD4-013 retained_intron Homo_sapiens 0 780
ENST00000548896 HECTD4-007 processed_transcript Homo_sapiens 0 278
ENST00000549141 HECTD4-005 processed_transcript Homo_sapiens 0 381
ENST00000549306 HECTD4-003 processed_transcript Homo_sapiens 0 381
ENST00000550722 HECTD4-201 protein_coding Homo_sapiens 0 12110
ENST00000550724 HECTD4-006 protein_coding Homo_sapiens 0 457
ENST00000550968 HECTD4-004 retained_intron Homo_sapiens 0 2060

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