C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kelch-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043008 Klhl6 10090 - 16:19946499-19983037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058839 Klhl6-001 19946499-19983037 protein_coding
  ENSMUST00000165530 Klhl6-002 19966044-19982930 nonsense_mediated_decay
  ENSMUST00000166801 Klhl6-004 19956970-19983007 nonsense_mediated_decay
  ENSMUST00000171910 Klhl6-003 19956950-19966319 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058839ENSMUST00000166801ENSMUST00000171910
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058839 1.801±1.07 1.288±0.32 1.078±0.03 0.808±0.28 4.931±1.55 0.619±0.20 1.742±0.21 1.695±0.44 2.759±2.39 1.943±1.00 0.563±0.45 1.752±0.94 0.911±0.47 0.089±0.05
ENSMUST00000166801 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A N/A 0.666±0.00 N/A
ENSMUST00000171910 N/A 0.961±0.00 N/A N/A N/A 0.596±0.00 N/A N/A N/A N/A N/A 2.039±0.00 0.334±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FY CIL_0005FY_0002 CGP 16:19946499-20127744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002467 IMP germinal center formation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0050853 IMP B cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026990 klhl6 kelch-like 6 (Drosophila) protein_coding Danio_rerio
ENSG00000172578 KLHL6 kelch-like family member 6 protein_coding Homo_sapiens

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