C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172578-ENSG00000114796 CGP 9606 3:183487531-183684477
GeneTranscriptPositionBiotype
ENSG00000114796 (KLHL24)
kelch-like family member 24 		ENST00000242810 (KLHL24-001) 183635568-183679478 protein_coding
ENST00000427201 (KLHL24-011) 183635623-183650697 protein_coding
ENST00000437402 (KLHL24-007) 183635619-183650538 protein_coding
ENST00000454495 (KLHL24-008) 183635620-183650707 protein_coding
ENST00000454652 (KLHL24-003) 183635623-183684477 protein_coding
ENST00000461813 (KLHL24-009) 183635623-183643231 processed_transcript
ENST00000468001 (KLHL24-016) 183636571-183650733 protein_coding
ENST00000468101 (KLHL24-012) 183635623-183650590 protein_coding
ENST00000473045 (KLHL24-010) 183635623-183650575 protein_coding
ENST00000475827 (KLHL24-015) 183635643-183671123 processed_transcript
ENST00000476808 (KLHL24-005) 183650357-183673008 protein_coding
ENST00000481126 (KLHL24-014) 183635635-183636450 retained_intron
ENST00000482138 (KLHL24-013) 183635623-183650758 protein_coding
ENST00000492409 (KLHL24-017) 183664101-183672484 processed_transcript
ENST00000493074 (KLHL24-006) 183635610-183650738 protein_coding
ENSG00000172578 (KLHL6)
kelch-like family member 6 		ENST00000341319 (KLHL6-001) 183487531-183555689 protein_coding
ENST00000468734 (KLHL6-002) 183487551-183555620 nonsense_mediated_decay
ENST00000487643 (KLHL6-003) 183520212-183544785 processed_transcript
ENST00000489245 (KLHL6-004) 183491010-183555665 retained_intron
ENSG00000242522 (KLHL6-AS1)
KLHL6 antisense RNA 1 		ENST00000491676 (KLHL6-AS1-001) 183548735-183552326 antisense
ENSG00000243584 (RP11-14I2.2)
 ENST00000474767 (RP11-14I2.2-001) 183613620-183616742 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005FY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043008-ENSMUSG00000062901 CGP 10090 16:19946499-20127744
GeneTranscriptPositionBiotype
ENSMUSG00000043008 (Klhl6)
kelch-like 6 		ENSMUST00000058839 (Klhl6-001) 19946499-19983037 protein_coding
ENSMUST00000165530 (Klhl6-002) 19966044-19982930 nonsense_mediated_decay
ENSMUST00000166801 (Klhl6-004) 19956970-19983007 nonsense_mediated_decay
ENSMUST00000171910 (Klhl6-003) 19956950-19966319 retained_intron
ENSMUSG00000062901 (Klhl24)
kelch-like 24 		ENSMUST00000023509 (Klhl24-201) 20097554-20127744 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FY_0001ENSG00000114796ENST00000242810ENST00000427201ENST00000437402ENST00000454495ENST00000454652ENST00000461813ENST00000468001ENST00000468101ENST00000473045ENST00000475827ENST00000476808ENST00000481126ENST00000482138ENST00000492409ENST00000493074ENSG00000172578ENST00000341319ENST00000468734ENST00000487643ENST00000489245ENSG00000242522ENST00000491676ENSG00000243584ENST00000474767CIL_0005FY_0002ENSMUSG00000043008ENSMUST00000058839ENSMUST00000165530ENSMUST00000166801ENSMUST00000171910ENSMUSG00000062901ENSMUST00000023509
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FY_0001ENSG00000114796ENST00000242810ENST00000454652ENSG00000172578ENST00000341319ENST00000468734ENST00000487643ENST00000489245ENSG00000242522ENST00000491676ENSG00000243584ENST00000474767CIL_0005FY_0002ENSMUSG00000043008ENSMUST00000058839ENSMUST00000166801ENSMUST00000171910ENSMUSG00000062901ENSMUST00000023509
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114796 ENST00000242810 N/A N/A 6.047±0.00 7.437±0.00 7.729±0.00 3.683±0.00 14.634±0.00 4.142±0.00 14.834±0.00 6.343±1.69 15.057±0.00 14.038±0.00 N/A 2.965±0.29
ENST00000427201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454652 3.999±0.00 N/A N/A 4.226±0.56 2.846±0.26 2.551±0.13 10.484±2.72 N/A 7.994±0.00 12.022±0.00 3.635±0.15 5.578±3.97 1.190±0.94 0.534±0.00
ENST00000461813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172578 ENST00000341319 0.480±0.00 1.990±0.00 N/A 0.141±0.07 N/A 0.368±0.00 0.081±0.00 0.286±0.07 N/A N/A 0.095±0.00 0.380±0.00 0.344±0.09 0.116±0.05
ENST00000468734 N/A 2.526±0.00 N/A 0.074±0.00 N/A 1.117±0.00 N/A N/A 0.279±0.00 0.888±0.08 0.097±0.00 0.583±0.11 0.787±0.10 N/A
ENST00000487643 0.212±0.00 N/A 0.136±0.00 0.474±0.00 N/A 0.066±0.00 N/A N/A N/A N/A 0.051±0.00 N/A N/A 0.149±0.00
ENST00000489245 N/A 2.630±0.00 N/A N/A 0.159±0.00 N/A 0.142±0.01 0.161±0.00 N/A 1.072±0.00 N/A 0.252±0.00 N/A 0.062±0.00
ENSG00000242522 ENST00000491676 0.047±0.00 0.412±0.00 N/A 0.265±0.00 0.163±0.00 0.796±0.00 0.221±0.02 0.144±0.00 0.399±0.32 0.039±0.02 N/A 0.362±0.00 0.107±0.02 0.313±0.25
ENSG00000243584 ENST00000474767 N/A 0.005±0.00 N/A 0.010±0.00 N/A N/A 0.064±0.02 N/A N/A 0.040±0.00 N/A N/A N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043008 ENSMUST00000058839 1.801±1.07 1.288±0.32 1.078±0.03 0.808±0.28 4.931±1.55 0.619±0.20 1.742±0.21 1.695±0.44 2.759±2.39 1.943±1.00 0.563±0.45 1.752±0.94 0.911±0.47 0.089±0.05
ENSMUST00000165530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166801 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A N/A 0.666±0.00 N/A
ENSMUST00000171910 N/A 0.961±0.00 N/A N/A N/A 0.596±0.00 N/A N/A N/A N/A N/A 2.039±0.00 0.334±0.00 N/A
ENSMUSG00000062901 ENSMUST00000023509 7.800±3.06 4.235±2.01 N/A 7.741±4.39 8.734±1.08 4.207±1.04 4.204±0.00 4.954±3.60 3.497±1.77 12.832±0.89 N/A 6.909±2.42 1.717±0.92 2.888±1.52

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