C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 62
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043858 Nup62 10090 + 7:44816088-44830809 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057195 Nup62-001 44816088-44830809 protein_coding
  ENSMUST00000107891 Nup62-002 44816088-44830809 protein_coding
  ENSMUST00000136861 Nup62-003 44818437-44828688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057195ENSMUST00000107891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057195 18.418±5.54 28.415±0.97 15.172±1.68 18.941±9.32 26.252±7.38 27.591±2.75 10.335±0.91 10.578±0.39 36.705±17.07 16.733±1.19 10.263±1.09 40.584±14.50 27.561±10.14 41.565±11.79
ENSMUST00000107891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.177±0.00 2.798±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005635 IEA nuclear envelope
GO:0005643 IDA:ISS nuclear pore
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006351 ISS transcription, DNA-templated
GO:0007166 ISS cell surface receptor signaling pathway
GO:0007569 IDA cell aging
GO:0008219 ISS cell death
GO:0008285 ISS negative regulation of cell proliferation
GO:0015031 IEA protein transport
GO:0016477 NAS cell migration
GO:0017056 IEA structural constituent of nuclear pore
GO:0030159 ISS receptor signaling complex scaffold activity
GO:0030529 ISO ribonucleoprotein complex
GO:0031965 IDA nuclear membrane
GO:0042059 IMP negative regulation of epidermal growth factor receptor signaling pathway
GO:0042169 ISS SH2 domain binding
GO:0043066 ISS negative regulation of apoptotic process
GO:0043069 ISS negative regulation of programmed cell death
GO:0043123 ISS positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 ISS ubiquitin binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043407 IMP negative regulation of MAP kinase activity
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046580 IMP negative regulation of Ras protein signal transduction
GO:0046966 ISS thyroid hormone receptor binding
GO:0051028 IEA mRNA transport
GO:0051425 IPI PTB domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020527 nup62l nucleoporin 62 like protein_coding Danio_rerio
ENSG00000213024 NUP62 nucleoporin 62kDa protein_coding Homo_sapiens

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