C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: otospiralin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044055 Otos 10090 - 1:92644218-92648841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053144 Otos-001 92644218-92648841 protein_coding
  ENSMUST00000159803 Otos-002 92644219-92648254 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053144ENSMUST00000159803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053144 0.316±0.16 0.395±0.27 0.034±0.00 0.119±0.00 0.354±0.14 0.172±0.10 0.091±0.00 0.241±0.08 0.103±0.06 0.092±0.03 0.093±0.02 0.203±0.10 0.105±0.06 0.099±0.00
ENSMUST00000159803 0.021±0.01 0.043±0.00 0.021±0.00 0.031±0.01 0.068±0.03 0.029±0.00 0.030±0.00 0.031±0.00 0.038±0.02 0.023±0.00 N/A 0.048±0.01 0.039±0.02 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TM CIL_0007TM_0002 VISTA 1:92418794-93021273
CIL_0009AE CIL_0009AE_0002 VISTA 1:92485614-93089442
CIL_0004UG CIL_0004UG_0003 CGP 1:92637145-92648841
CIL_0003NP CIL_0003NP_0002 CGP 1:92644218-92860779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0007605 IMP sensory perception of sound

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088268 OTOS otospiralin protein_coding Danio_rerio
ENSG00000178602 OTOS otospiralin protein_coding Homo_sapiens

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