C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2900011O08 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044117 2900011O08Rik 10090 + 16:13986604-14101500 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056521 2900011O08Rik-001 13986604-14101500 protein_coding
  ENSMUST00000118412 2900011O08Rik-002 13986657-14100228 protein_coding
  ENSMUST00000131608 2900011O08Rik-003 13986674-14095987 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056521ENSMUST00000118412ENSMUST00000131608
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056521 0.277±0.09 N/A 0.099±0.03 38.436±11.62 0.205±0.02 0.342±0.28 0.038±0.00 0.235±0.02 0.043±0.04 0.065±0.04 0.017±0.00 0.242±0.18 0.038±0.02 11.563±1.54
ENSMUST00000118412 N/A 0.719±0.18 N/A 55.489±0.00 N/A 0.310±0.12 0.062±0.03 N/A 0.111±0.00 N/A N/A 0.198±0.09 0.045±0.02 3.515±0.00
ENSMUST00000131608 N/A N/A N/A 136.645±0.00 N/A N/A 0.107±0.00 N/A N/A 0.110±0.00 N/A 0.146±0.00 0.060±0.00 22.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UU CIL_0006UU_0002 CGP 16:13986604-14159274

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007026 IMP negative regulation of microtubule depolymerization
GO:0015630 IDA microtubule cytoskeleton
GO:0021822 IMP negative regulation of cell motility involved in cerebral cortex radial glia guided migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086706 C6H16orf45 chromosome 16 open reading frame 45 protein_coding Danio_rerio
ENSG00000166780 C16orf45 chromosome 16 open reading frame 45 protein_coding Homo_sapiens

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