C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: canopy 1 homolog (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044681 Cnpy1 10090 - 5:28200819-28245792 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117098 Cnpy1-003 28205768-28210168 protein_coding
  ENSMUST00000118882 Cnpy1-004 28202449-28210022 protein_coding
  ENSMUST00000120068 Cnpy1-002 28205460-28237873 protein_coding
  ENSMUST00000141196 Cnpy1-005 28209245-28210363 protein_coding
  ENSMUST00000141601 Cnpy1-001 28200819-28245792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000117098ENSMUST00000118882ENSMUST00000120068ENSMUST00000141196ENSMUST00000141601
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117098 N/A N/A N/A 0.109±0.06 N/A 0.011±0.00 0.042±0.00 0.302±0.09 0.104±0.00 0.015±0.00
ENSMUST00000118882 0.063±0.00 0.009±0.00 5.986±4.26 0.123±0.08 0.109±0.08 0.027±0.02 N/A 0.395±0.26 3.677±2.06 0.028±0.02
ENSMUST00000120068 0.026±0.00 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A
ENSMUST00000141196 N/A N/A N/A N/A N/A N/A N/A 1.535±0.00 N/A N/A
ENSMUST00000141601 N/A 0.004±0.00 2.415±1.70 0.127±0.02 0.038±0.02 0.012±0.00 0.033±0.01 0.142±0.05 1.044±0.85 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0002 VISTA 5:27878923-28480422
CIL_000962 CIL_000962_0002 VISTA 5:28103755-28704882
CIL_0000KB CIL_0000KB_0003 CGP 5:28165694-28245792
CIL_0006DB CIL_0006DB_0003 CGP 5:28200819-28419244

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003757 cnpy1 canopy1 protein_coding Danio_rerio
ENSG00000146910 CNPY1 canopy FGF signaling regulator 1 protein_coding Homo_sapiens

Loading