C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008KT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1418 VISTA 9606 7:155171352-155773114
GeneTranscriptPositionBiotype
ENSG00000146910 (CNPY1)
canopy FGF signaling regulator 1 		ENST00000321736 (CNPY1-001) 155501132-155533862 protein_coding
ENST00000406197 (CNPY1-002) 155474206-155533838 protein_coding
ENSG00000164778 (EN2)
engrailed homeobox 2 		ENST00000297375 (EN2-001) 155458129-155464831 protein_coding
ENSG00000184863 (RBM33)
RNA binding motif protein 33 		ENST00000287912 (RBM33-008) 155644451-155701183 protein_coding
ENST00000307403 (RBM33-009) 155672880-155745720 nonsense_mediated_decay
ENST00000341148 (RBM33-001) 155746586-155781485 protein_coding
ENST00000392755 (RBM33-004) 155766556-155775460 protein_coding
ENST00000392759 (RBM33-005) 155644702-155701490 protein_coding
ENST00000392761 (RBM33-003) 155700891-155766896 protein_coding
ENST00000401878 (RBM33-007) 155644679-155781479 protein_coding
ENST00000438356 (RBM33-002) 155746419-155766556 protein_coding
ENST00000440108 (RBM33-010) 155680669-155737593 protein_coding
ENST00000486747 (RBM33-006) 155706814-155718435 processed_transcript
ENSG00000186480 (INSIG1)
insulin induced gene 1 		ENST00000340368 (INSIG1-001) 155297776-155310235 protein_coding
ENST00000342407 (INSIG1-003) 155297889-155308757 protein_coding
ENST00000344756 (INSIG1-201) 155297776-155310233 protein_coding
ENST00000425172 (INSIG1-002) 155297829-155298655 protein_coding
ENST00000468307 (INSIG1-004) 155301607-155303018 retained_intron
ENST00000476756 (INSIG1-005) 155298561-155308960 protein_coding
ENSG00000204960 (BLACE)
B-cell acute lymphoblastic leukemia expressed 		ENST00000378120 (BLACE-001) 155356985-155367934 protein_coding
ENST00000616210 (BLACE-201) 155357640-155358179 protein_coding
ENSG00000216895 (AC009403.2)
 ENST00000401694 (AC009403.2-001) 155611231-155644401 antisense
ENST00000460022 (AC009403.2-005) 155642264-155644377 antisense
ENST00000469539 (AC009403.2-002) 155643201-155644406 antisense
ENST00000472015 (AC009403.2-004) 155643468-155645205 antisense
ENST00000474963 (AC009403.2-003) 155643084-155644406 antisense
ENSG00000217825 (AC099552.4)
 ENST00000404289 (AC099552.4-001) 155196687-155198436 lincRNA
ENST00000431083 (AC099552.4-002) 155196563-155198455 lincRNA
ENSG00000218672 (AC008060.7)
 ENST00000401499 (AC008060.7-001) 155382076-155396356 lincRNA
ENSG00000225612 (AC099552.2)
 ENST00000418523 (AC099552.2-001) 155267299-155268052 lincRNA
ENSG00000227365 (AC008060.5)
 ENST00000415333 (AC008060.5-001) 155510283-155518623 antisense
ENSG00000228521 (AC099552.3)
 ENST00000454149 (AC099552.3-001) 155204147-155205189 lincRNA
ENSG00000236544 (AC008060.8)
 ENST00000419225 (AC008060.8-001) 155421206-155457099 lincRNA
ENSG00000260426 (RP5-912I13.1)
 ENST00000569431 (RP5-912I13.1-001) 155399922-155401782 sense_overlapping
ENSG00000273117 (AC144652.1)
 ENST00000609974 (AC144652.1-001) 155295918-155297541 lincRNA
ENSG00000278998 (RP11-1430O6.1)
 ENST00000624248 (RP11-1430O6.1-001) 155222903-155223851 TEC
CIL_0008KT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1418 VISTA 10090 5:27878923-28480422
GeneTranscriptPositionBiotype
ENSMUSG00000002633 (Shh)
sonic hedgehog 		ENSMUST00000002708 (Shh-001) 28456815-28467101 protein_coding
ENSMUSG00000039095 (En2)
engrailed 2 		ENSMUST00000036177 (En2-001) 28165694-28172166 protein_coding
ENSMUSG00000044681 (Cnpy1)
canopy 1 homolog (zebrafish) 		ENSMUST00000117098 (Cnpy1-003) 28205768-28210168 protein_coding
ENSMUST00000118882 (Cnpy1-004) 28202449-28210022 protein_coding
ENSMUST00000120068 (Cnpy1-002) 28205460-28237873 protein_coding
ENSMUST00000141196 (Cnpy1-005) 28209245-28210363 protein_coding
ENSMUST00000141601 (Cnpy1-001) 28200819-28245792 protein_coding
ENSMUSG00000045294 (Insig1)
insulin induced gene 1 		ENSMUST00000059155 (Insig1-001) 28071363-28078662 protein_coding
ENSMUSG00000048271 (Rbm33)
RNA binding motif protein 33 		ENSMUST00000030920 (Rbm33-001) 28317202-28353664 protein_coding
ENSMUST00000059644 (Rbm33-201) 28317189-28419242 protein_coding
ENSMUST00000090355 (Rbm33-002) 28317121-28352868 protein_coding
ENSMUST00000114884 (Rbm33-003) 28317177-28419244 protein_coding
ENSMUST00000133313 (Rbm33-004) 28410661-28414029 protein_coding
ENSMUST00000144967 (Rbm33-005) 28394632-28413677 protein_coding
ENSMUSG00000097453 (Gm26894)
predicted gene, 26894 		ENSMUST00000180828 (Gm26894-201) 28466374-28480973 lincRNA
ENSMUSG00000097673 (Gm26608)
predicted gene, 26608 		ENSMUST00000180740 (Gm26608-201) 28019465-28071105 lincRNA
ENSMUST00000181503 (Gm26608-202) 28053951-28055459 lincRNA
ENSMUSG00000097726 (9530036O11Rik)
RIKEN cDNA 9530036O11Rik 		ENSMUST00000180878 (9530036O11Rik-201) 28458274-28933995 lincRNA
ENSMUST00000181202 (9530036O11Rik-202) 28466984-28719209 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008KT_0001ENSG00000146910ENST00000321736ENST00000406197ENSG00000164778ENST00000297375ENSG00000184863ENST00000287912ENST00000307403ENST00000341148ENST00000392755ENST00000392759ENST00000392761ENST00000401878ENST00000438356ENST00000440108ENST00000486747ENSG00000186480ENST00000340368ENST00000342407ENST00000344756ENST00000425172ENST00000468307ENST00000476756ENSG00000204960ENST00000378120ENST00000616210ENSG00000216895ENST00000401694ENST00000460022ENST00000469539ENST00000472015ENST00000474963ENSG00000217825ENST00000404289ENST00000431083ENSG00000218672ENST00000401499ENSG00000225612ENST00000418523ENSG00000227365ENST00000415333ENSG00000228521ENST00000454149ENSG00000236544ENST00000419225ENSG00000260426ENST00000569431ENSG00000273117ENST00000609974ENSG00000278998ENST00000624248CIL_0008KT_0002ENSMUSG00000002633ENSMUST00000002708ENSMUSG00000039095ENSMUST00000036177ENSMUSG00000044681ENSMUST00000117098ENSMUST00000118882ENSMUST00000120068ENSMUST00000141196ENSMUST00000141601ENSMUSG00000045294ENSMUST00000059155ENSMUSG00000048271ENSMUST00000030920ENSMUST00000059644ENSMUST00000090355ENSMUST00000114884ENSMUST00000133313ENSMUST00000144967ENSMUSG00000097453ENSMUST00000180828ENSMUSG00000097673ENSMUST00000180740ENSMUST00000181503ENSMUSG00000097726ENSMUST00000180878ENSMUST00000181202
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146910 ENST00000321736 N/A N/A N/A 0.052±0.03 0.004±0.00 N/A N/A N/A N/A 0.083±0.00 N/A 0.009±0.00 N/A 0.231±0.10
ENST00000406197 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A 0.042±0.01 N/A 0.159±0.00
ENSG00000164778 ENST00000297375 0.019±0.00 0.032±0.00 N/A 0.165±0.00 0.094±0.00 0.064±0.00 0.045±0.00 0.058±0.00 0.024±0.00 0.011±0.00 0.053±0.00 0.283±0.07 0.041±0.01 0.779±0.19
ENSG00000184863 ENST00000287912 N/A N/A 18.747±0.00 19.834±0.00 21.245±0.00 18.669±0.00 N/A N/A 19.892±0.00 N/A 5.063±0.00 9.896±0.00 3.465±3.03 11.149±0.00
ENST00000307403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000341148 N/A 3.486±0.00 N/A N/A 2.371±0.00 N/A 0.576±0.00 1.751±0.00 0.564±0.00 3.575±0.00 N/A 3.298±1.09 0.240±0.00 N/A
ENST00000392755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.816±0.00 N/A
ENST00000401878 3.940±0.00 4.570±0.00 2.291±0.00 3.278±2.13 2.853±1.10 2.600±0.06 1.475±1.13 2.191±0.50 1.764±0.37 3.806±1.93 4.752±0.00 2.361±0.08 1.053±0.29 3.962±1.98
ENST00000438356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186480 ENST00000340368 17.083±0.00 13.680±0.00 2.056±0.00 21.028±11.90 21.634±16.67 5.896±2.27 2.593±1.34 32.270±23.64 25.720±19.47 30.928±25.87 1.678±0.72 16.497±15.71 13.623±4.95 15.580±9.23
ENST00000342407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.915±0.00 7.607±0.00 6.601±0.00
ENST00000344756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.001±0.00 N/A N/A
ENST00000425172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.00 10.965±0.00 15.442±0.00 12.259±0.00
ENSG00000204960 ENST00000378120 0.017±0.00 0.009±0.00 N/A 0.010±0.00 0.009±0.00 0.042±0.00 N/A 0.018±0.00 0.040±0.00 N/A 0.031±0.00 0.019±0.00 N/A 0.048±0.01
ENST00000616210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216895 ENST00000401694 0.752±0.00 N/A 1.719±0.00 1.436±0.00 1.384±0.00 N/A N/A N/A 3.027±0.00 N/A N/A 0.388±0.00 N/A N/A
ENST00000460022 N/A 1.501±0.00 N/A 0.189±0.01 0.425±0.28 0.305±0.01 0.703±0.00 3.973±0.00 0.646±0.00 0.546±0.00 N/A 0.652±0.25 0.395±0.17 1.071±0.29
ENST00000469539 0.328±0.00 1.603±0.00 N/A 0.692±0.00 0.770±0.00 0.374±0.00 N/A N/A N/A 0.213±0.08 N/A 0.393±0.00 1.092±0.41 3.536±2.20
ENST00000472015 N/A N/A N/A N/A N/A N/A N/A N/A 3.014±0.00 N/A N/A N/A 0.764±0.00 N/A
ENST00000474963 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A 0.389±0.00 N/A N/A 0.159±0.00 N/A N/A
ENSG00000217825 ENST00000404289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A
ENST00000431083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218672 ENST00000401499 0.023±0.00 0.035±0.00 N/A 0.166±0.07 0.032±0.00 0.011±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.184±0.06
ENSG00000225612 ENST00000418523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.580±0.56
ENSG00000227365 ENST00000415333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00
ENSG00000228521 ENST00000454149 N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000236544 ENST00000419225 N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260426 ENST00000569431 N/A N/A N/A 0.495±0.00 N/A N/A N/A 0.160±0.00 N/A N/A N/A 0.050±0.02 0.028±0.00 0.371±0.03
ENSG00000273117 ENST00000609974 0.737±0.00 0.906±0.00 N/A 2.215±1.61 0.466±0.20 0.493±0.00 0.139±0.04 0.772±0.56 0.567±0.52 1.175±0.58 0.078±0.00 1.108±0.83 0.851±0.17 2.154±0.83
ENSG00000278998 ENST00000624248 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.038±0.01 0.157±0.16 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002633 ENSMUST00000002708 0.109±0.07 11.250±6.24 31.060±2.27 1.155±0.43 N/A 0.322±0.06 N/A 0.382±0.03 0.024±0.01 2.459±1.27 0.021±0.00 0.040±0.02 0.078±0.09 0.123±0.14
ENSMUSG00000039095 ENSMUST00000036177 0.045±0.03 0.260±0.03 0.004±0.00 6.088±4.28 0.029±0.01 N/A 0.011±0.00 0.090±0.04 0.009±0.01 0.017±0.01 0.151±0.07 0.033±0.02 0.058±0.03 0.227±0.08
ENSMUSG00000044681 ENSMUST00000117098 N/A N/A N/A N/A N/A 0.109±0.06 N/A N/A 0.011±0.00 0.042±0.00 N/A 0.302±0.09 0.104±0.00 0.015±0.00
ENSMUST00000118882 0.063±0.00 N/A 0.009±0.00 5.986±4.26 N/A 0.123±0.08 N/A 0.109±0.08 0.027±0.02 N/A N/A 0.395±0.26 3.677±2.06 0.028±0.02
ENSMUST00000120068 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A
ENSMUST00000141196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.535±0.00 N/A N/A
ENSMUST00000141601 N/A N/A 0.004±0.00 2.415±1.70 N/A 0.127±0.02 N/A 0.038±0.02 0.012±0.00 0.033±0.01 N/A 0.142±0.05 1.044±0.85 N/A
ENSMUSG00000045294 ENSMUST00000059155 170.147±68.18 375.252±17.90 20.063±4.59 20.098±7.20 195.178±86.67 60.444±16.08 8.955±0.84 32.102±4.33 155.308±107.23 56.134±15.56 3.999±0.63 58.505±27.00 20.351±17.32 6.733±2.73
ENSMUSG00000048271 ENSMUST00000030920 N/A N/A N/A 3.648±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.133±0.00 5.035±0.00
ENSMUST00000059644 1.436±0.00 7.682±2.25 4.541±0.80 6.858±0.99 2.014±0.55 N/A N/A 2.027±0.00 2.470±0.65 N/A 5.214±1.17 5.899±1.86 4.117±1.44 2.456±0.30
ENSMUST00000090355 N/A 29.790±4.42 N/A 11.760±0.00 N/A N/A N/A N/A N/A N/A N/A 16.157±0.00 14.309±2.41 8.822±0.00
ENSMUST00000114884 6.901±2.40 6.876±4.03 4.718±1.03 8.803±3.15 10.759±5.10 10.893±3.99 3.669±0.90 7.050±0.75 4.837±1.07 10.262±1.82 0.962±0.00 11.748±4.02 2.640±0.28 5.741±2.22
ENSMUST00000133313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097453 ENSMUST00000180828 N/A N/A 19.351±2.45 2.556±0.00 0.090±0.03 N/A N/A 0.236±0.04 0.047±0.03 N/A N/A 0.102±0.07 0.054±0.04 0.158±0.00
ENSMUSG00000097673 ENSMUST00000180740 0.033±0.00 0.057±0.04 N/A 0.056±0.00 0.026±0.00 0.056±0.00 0.020±0.01 0.028±0.01 0.017±0.01 0.017±0.00 0.029±0.00 0.060±0.01 N/A 0.252±0.01
ENSMUST00000181503 0.139±0.10 0.080±0.00 N/A 0.042±0.02 0.121±0.07 0.104±0.00 0.054±0.03 0.093±0.04 1.378±1.00 0.081±0.00 N/A 0.121±0.07 0.029±0.01 0.371±0.00
ENSMUSG00000097726 ENSMUST00000180878 0.042±0.00 16.598±0.00 N/A N/A N/A N/A 0.042±0.01 0.400±0.04 0.007±0.00 N/A N/A N/A N/A 0.036±0.00
ENSMUST00000181202 0.017±0.00 N/A N/A 0.113±0.00 0.023±0.00 N/A 0.026±0.00 0.058±0.01 0.014±0.00 N/A N/A 0.055±0.03 0.025±0.02 0.094±0.06

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