Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	protocadherin beta 7
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000045062	Pcdhb7	10090	+	18:37341702-37345207	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000053037		Pcdhb7-201	37341702-37345207	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000053037	1.737±1.06	0.655±0.11	0.406±0.02	2.523±0.91	1.116±0.16	0.300±0.12	0.244±0.03	0.284±0.08	0.033±0.02	2.534±0.11	0.055±0.03	2.846±1.43	0.045±0.05	0.067±0.04

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00062S	CIL_00062S_000Z	CGP	18:37333946-37345207
CIL_00062S	CIL_00062S_000K	CGP	18:37341702-37357610

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005509	IEA	calcium ion binding
GO:0005886	IEA	plasma membrane
GO:0007156	IEA	homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021	IEA	integral component of membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000010684	CU915772.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000071889	pcdh2g8	protocadherin 2 gamma 8	protein_coding	Danio_rerio
ENSDARG00000071891	pcdh2g6	protocadherin 2 gamma 6	protein_coding	Danio_rerio
ENSDARG00000071892	CU915772.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000074738	pcdh2g9	protocadherin 2 gamma 9	protein_coding	Danio_rerio
ENSDARG00000077343	CT573264.2	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000077867	CT573264.3	Uncharacterized protein	protein_coding	Danio_rerio
ENSDARG00000079937	pcdh2g5	protocadherin 2 gamma 5	protein_coding	Danio_rerio
ENSG00000081818	PCDHB4	protocadherin beta 4	protein_coding	Homo_sapiens

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