C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045503 Sys1 10090 + 2:164456964-164479638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072452 Sys1-201 164460971-164465508 protein_coding
  ENSMUST00000109352 Sys1-001 164456976-164465512 protein_coding
  ENSMUST00000125086 Sys1-004 164461309-164474467 nonsense_mediated_decay
  ENSMUST00000138268 Sys1-003 164461000-164474467 nonsense_mediated_decay
  ENSMUST00000142347 Sys1-006 164456964-164460936 processed_transcript
  ENSMUST00000142892 Sys1-007 164461053-164479638 nonsense_mediated_decay
  ENSMUST00000155250 Sys1-002 164457088-164461308 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072452ENSMUST00000125086ENSMUST00000142892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072452 45.241±1.14 117.826±14.91 20.612±3.66 27.995±3.17 79.255±39.80 81.963±13.74 21.271±4.32 49.427±7.66 35.422±19.20 51.384±13.08 10.589±0.93 75.327±36.88 18.180±4.43 11.168±0.30
ENSMUST00000125086 N/A N/A N/A N/A 0.893±0.00 N/A N/A N/A N/A N/A N/A 0.989±0.00 N/A N/A
ENSMUST00000142892 N/A 81.467±5.39 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017606 sys1 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein_coding Danio_rerio

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