C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: one cut domain, family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045518 Onecut3 10090 + 10:80494835-80517276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051773 Onecut3-001 80494835-80517276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000051773
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000051773 0.005±0.00 1.993±1.56 0.013±0.01 0.024±0.00 0.013±0.00 0.015±0.01 0.005±0.00 0.017±0.01 0.005±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000188 CIL_000188_0002 CGP 10:80409514-80517276
CIL_0005ZE CIL_0005ZE_0003 CGP 10:80494835-80539124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0031018 TAS endocrine pancreas development
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056395 onecut3a one cut homeobox 3a protein_coding Danio_rerio
ENSDARG00000091059 ONECUT3 (2 of 2) one cut homeobox 3 protein_coding Danio_rerio
ENSG00000205922 ONECUT3 one cut homeobox 3 protein_coding Homo_sapiens

Loading