C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PQ loop repeat containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045679 Pqlc3 10090 - 12:16988648-17000408 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054536 Pqlc3-001 16988648-17000118 protein_coding
  ENSMUST00000067572 Pqlc3-003 16992961-17000025 protein_coding
  ENSMUST00000134938 Pqlc3-005 16995642-17000408 processed_transcript
  ENSMUST00000137960 Pqlc3-006 16995642-17000408 processed_transcript
  ENSMUST00000140933 Pqlc3-004 16988648-17000032 retained_intron
  ENSMUST00000141232 Pqlc3-007 16993510-17000026 processed_transcript
  ENSMUST00000156360 Pqlc3-002 16993655-17000116 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054536ENSMUST00000067572ENSMUST00000140933ENSMUST00000141232ENSMUST00000156360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054536 20.395±6.16 6.044±0.68 8.952±1.04 0.267±0.00 12.897±0.81 8.075±1.21 2.439±0.69 1.722±0.23 1.737±1.42 16.061±2.25 0.536±0.16 3.096±1.14 3.042±1.94 0.384±0.17
ENSMUST00000067572 N/A 7.480±3.15 N/A N/A N/A 6.183±1.49 N/A 1.165±0.00 0.195±0.07 N/A N/A 2.600±0.69 N/A N/A
ENSMUST00000140933 N/A N/A N/A 0.223±0.03 N/A 1.667±0.00 N/A 0.153±0.00 0.143±0.04 N/A 0.117±0.01 0.531±0.01 0.332±0.00 0.063±0.01
ENSMUST00000141232 N/A 19.930±5.45 N/A N/A 25.244±3.40 32.957±14.51 N/A 3.078±0.46 N/A 23.394±5.29 N/A 7.683±1.91 N/A 0.644±0.00
ENSMUST00000156360 2.144±0.41 N/A 1.552±0.00 0.370±0.05 1.536±0.13 1.626±0.28 0.503±0.00 0.322±0.08 0.061±0.03 1.954±0.07 0.288±0.12 0.797±0.24 0.640±0.32 0.144±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054251 pqlc3 PQ loop repeat containing 3 protein_coding Danio_rerio
ENSG00000162976 PQLC3 PQ loop repeat containing 3 protein_coding Homo_sapiens

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