C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PQ loop repeat containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162976 PQLC3 9606 + 2:11155198-11178874 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295083 PQLC3-001 11155372-11178874 protein_coding
  ENST00000402361 PQLC3-011 11155535-11178024 protein_coding
  ENST00000428481 PQLC3-002 11155609-11178279 protein_coding
  ENST00000441908 PQLC3-201 11155372-11178870 protein_coding
  ENST00000445402 PQLC3-010 11155198-11172046 protein_coding
  ENST00000445921 PQLC3-005 11155431-11177957 nonsense_mediated_decay
  ENST00000464700 PQLC3-008 11155515-11160819 retained_intron
  ENST00000476787 PQLC3-003 11155533-11172029 processed_transcript
  ENST00000487471 PQLC3-007 11172012-11178168 processed_transcript
  ENST00000496444 PQLC3-009 11160290-11160753 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295083ENST00000402361ENST00000428481ENST00000441908ENST00000445402ENST00000445921ENST00000464700
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295083 8.233±0.00 N/A 0.933±0.00 0.584±0.00 2.346±0.00 1.265±0.01 0.954±0.31 5.634±0.00 1.493±0.04 N/A 0.978±0.94 5.198±3.72 3.383±0.00 1.542±0.00
ENST00000402361 N/A N/A N/A N/A N/A 1.832±0.00 N/A N/A 7.692±0.00 3.101±0.00 0.629±0.00 N/A 1.794±0.00 1.232±0.00
ENST00000428481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.538±0.00 N/A N/A
ENST00000441908 1.805±0.00 6.424±0.00 0.709±0.00 0.685±0.00 6.649±5.52 4.297±3.48 2.098±0.00 4.578±0.00 1.382±0.00 4.454±0.00 0.587±0.00 2.656±1.09 1.877±0.00 6.897±0.00
ENST00000445402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00 N/A N/A N/A
ENST00000445921 N/A N/A N/A N/A 1.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464700 N/A N/A N/A N/A N/A N/A 2.530±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001X CIL_00001X_0002 CGP 2:11155198-11348330

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054251 pqlc3 PQ loop repeat containing 3 protein_coding Danio_rerio
ENSMUSG00000045679 Pqlc3 PQ loop repeat containing protein_coding Mus_musculus

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