C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A430105I19 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045838 A430105I19Rik 10090 - 2:118754158-118762661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059997 A430105I19Rik-001 118754158-118762661 protein_coding
  ENSMUST00000151270 A430105I19Rik-002 118757498-118762625 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059997ENSMUST00000151270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059997 2.755±0.83 1.321±0.74 3.581±0.22 0.954±0.79 1.861±1.33 4.658±1.90 4.790±1.86 0.813±0.12 0.291±0.19 6.080±2.43 5.624±1.18 2.309±1.34 3.506±2.58 0.319±0.11
ENSMUST00000151270 N/A N/A N/A N/A 0.640±0.00 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090013 C17H15orf52 chromosome 15 open reading frame 52 protein_coding Danio_rerio
ENSG00000188549 C15orf52 chromosome 15 open reading frame 52 protein_coding Homo_sapiens

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