C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hippocalcin-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046093 Hpcal4 10090 + 4:123183227-123194701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059667 Hpcal4-001 123183227-123194701 protein_coding
  ENSMUST00000106246 Hpcal4-002 123183239-123191513 protein_coding
  ENSMUST00000126995 Hpcal4-003 123183499-123188798 protein_coding
  ENSMUST00000136619 Hpcal4-004 123183516-123184151 processed_transcript
  ENSMUST00000152194 Hpcal4-005 123183729-123190744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059667ENSMUST00000106246ENSMUST00000126995ENSMUST00000136619ENSMUST00000152194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059667 0.167±0.01 1.260±0.35 0.057±0.01 9.126±6.44 0.231±0.05 0.681±0.10 0.048±0.00 0.355±0.08 0.007±0.01 1.369±0.15 0.021±0.01 0.082±0.05 0.101±0.08 1.739±0.78
ENSMUST00000106246 N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A 0.006±0.00 N/A 0.050±0.00 0.086±0.05 N/A 0.193±0.00
ENSMUST00000126995 N/A 3.451±1.65 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.352±0.22 N/A N/A
ENSMUST00000136619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A
ENSMUST00000152194 0.248±0.00 N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A 0.175±0.02 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005246 IEA calcium channel regulator activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008022 IEA protein C-terminus binding
GO:0008150 ND biological_process
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070491 hpcal4 hippocalcin like 4 protein_coding Danio_rerio
ENSG00000116983 HPCAL4 hippocalcin like 4 protein_coding Homo_sapiens

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