C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059667 Hpcal4-001 ENSMUSG00000046093 10090 + 4:123183227-123194701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059667 0.167±0.01 1.260±0.35 0.057±0.01 9.126±6.44 0.231±0.05 0.681±0.10 0.048±0.00 0.355±0.08 0.007±0.01 1.369±0.15 0.021±0.01 0.082±0.05 0.101±0.08 1.739±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IEA calcium channel regulator activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008022 IEA protein C-terminus binding
GO:0008150 ND biological_process
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295156 VSNL1-001 protein_coding Homo_sapiens 0 470
ENST00000372844 HPCAL4-001 protein_coding Homo_sapiens 0 1086
ENST00000404666 VSNL1-003 protein_coding Homo_sapiens 0 470
ENST00000406397 VSNL1-002 protein_coding Homo_sapiens 0 470
ENST00000612703 HPCAL4-201 protein_coding Homo_sapiens 0 534
ENST00000617690 HPCAL4-202 protein_coding Homo_sapiens 0 1238

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