C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nerve growth factor receptor (TNFRSF16) associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046432 Ngfrap1 10090 + X:136270253-136271978 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053540 Ngfrap1-001 136270261-136271978 protein_coding
  ENSMUST00000113112 Ngfrap1-002 136270305-136271964 protein_coding
  ENSMUST00000113113 Ngfrap1-003 136270775-136271920 protein_coding
  ENSMUST00000178632 Ngfrap1-201 136270253-136271978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053540ENSMUST00000113112ENSMUST00000113113ENSMUST00000178632
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053540 7.172±5.65 13.715±4.58 26.746±2.78 107.601±68.64 3.310±1.53 7.971±1.57 1.371±0.61 9.622±1.57 67.594±63.30 13.286±1.80 0.327±0.12 35.035±6.84 161.473±120.34 4.848±0.48
ENSMUST00000113112 3.867±2.43 3.867±0.59 10.873±0.83 54.722±11.18 3.390±3.30 2.531±0.60 0.592±0.16 4.009±1.44 50.539±25.82 4.337±0.60 0.840±0.40 13.333±6.43 66.042±28.26 1.737±0.24
ENSMUST00000113113 7.409±5.36 12.500±2.30 5.693±0.00 N/A 7.439±3.54 4.398±1.52 2.217±0.29 7.465±1.79 0.475±0.34 8.287±3.46 0.730±0.35 44.966±53.40 127.870±96.58 3.270±0.25
ENSMUST00000178632 N/A N/A N/A N/A N/A N/A N/A 2.265±0.00 N/A N/A 0.075±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000726 CIL_000726_0002 CGP X:136245079-136271978

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005123 IPI death receptor binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 ISO cytoplasm
GO:0005829 IDA cytosol
GO:0008625 IPI extrinsic apoptotic signaling pathway via death domain receptors
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166681 NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 protein_coding Homo_sapiens

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