C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nerve growth factor receptor (TNFRSF16) associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053540 Ngfrap1-001 ENSMUSG00000046432 10090 + X:136270261-136271978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053540
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053540 7.172±5.65 13.715±4.58 26.746±2.78 107.601±68.64 3.310±1.53 7.971±1.57 1.371±0.61 9.622±1.57 67.594±63.30 13.286±1.80 0.327±0.12 35.035±6.84 161.473±120.34 4.848±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000726 CIL_000726_0002 CGP X:136245079-136271978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005123 IPI death receptor binding
GO:0005634 IEA nucleus
GO:0005737 ISO cytoplasm
GO:0005829 IDA cytosol
GO:0008625 IPI extrinsic apoptotic signaling pathway via death domain receptors
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361298 NGFRAP1-002 protein_coding Homo_sapiens 0 448
ENST00000372634 NGFRAP1-004 protein_coding Homo_sapiens 0 448
ENST00000372635 NGFRAP1-003 protein_coding Homo_sapiens 0 446
ENST00000372645 NGFRAP1-001 protein_coding Homo_sapiens 0 448
ENST00000414048 CTA-714B7.4-001 processed_pseudogene Homo_sapiens 1e-37 159

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