C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence C77370
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046449 C77370 10090 - X:104077434-104201185 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056502 C77370-002 104083714-104201144 protein_coding
  ENSMUST00000087879 C77370-201 104077435-104201117 protein_coding
  ENSMUST00000118314 C77370-001 104077434-104201185 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056502ENSMUST00000087879ENSMUST00000118314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056502 0.129±0.02 1.713±0.32 N/A N/A 0.094±0.07 0.128±0.05 0.007±0.00 0.076±0.05 0.007±0.00 0.393±0.13 0.004±0.00 3.142±1.19 0.049±0.03 0.153±0.06
ENSMUST00000087879 0.024±0.02 N/A 0.035±0.00 1.016±0.54 0.063±0.01 0.022±0.00 0.016±0.00 0.029±0.00 0.006±0.00 0.273±0.07 0.003±0.00 1.990±0.61 0.023±0.00 0.084±0.01
ENSMUST00000118314 0.123±0.00 0.874±0.11 0.013±0.00 1.613±0.31 0.094±0.03 0.096±0.06 0.017±0.00 0.061±0.03 N/A 0.212±0.11 N/A 4.734±3.86 0.023±0.00 0.047±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S6 CIL_0006S6_0002 CGP X:103957163-104201185
CIL_000121 CIL_000121_0002 CGP X:104077434-104413856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005634 IBA nucleus
GO:0006287 IBA base-excision repair, gap-filling
GO:0006297 IBA nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0007399 IEA nervous system development
GO:0008408 IBA 3'-5' exonuclease activity
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0045004 IBA DNA replication proofreading
GO:0071897 IBA DNA biosynthetic process
GO:0090305 IBA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029296 protein_coding Danio_rerio
ENSDARG00000089271 si:dkey-114c15.7 si:dkey-114c15.7 protein_coding Danio_rerio
ENSG00000050030 KIAA2022 KIAA2022 protein_coding Homo_sapiens

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