C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence C77370
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087879 C77370-201 ENSMUSG00000046449 10090 - X:104077435-104201117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087879
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087879 0.024±0.02 0.035±0.00 1.016±0.54 0.063±0.01 0.022±0.00 0.016±0.00 0.029±0.00 0.006±0.00 0.273±0.07 0.003±0.00 1.990±0.61 0.023±0.00 0.084±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S6 CIL_0006S6_0002 CGP X:103957163-104201185
CIL_000121 CIL_000121_0002 CGP X:104077434-104413856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005634 IBA nucleus
GO:0006287 IBA base-excision repair, gap-filling
GO:0006297 IBA nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0007399 IEA nervous system development
GO:0008408 IBA 3'-5' exonuclease activity
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0045004 IBA DNA replication proofreading
GO:0071897 IBA DNA biosynthetic process
GO:0090305 IBA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000055682 KIAA2022-001 protein_coding Homo_sapiens 0 5982
ENST00000424929 KIAA2022-002 protein_coding Homo_sapiens 0 501
ENST00000616200 KIAA2022-201 protein_coding Homo_sapiens 0 5982

Loading