C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fer3-like (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046518 Ferd3l 10090 + 12:33928425-33929310 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061035 Ferd3l-201 33928425-33929310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000061035
Transcript ID Brain Testis
ENSMUST00000061035 0.097±0.00 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084F CIL_00084F_0002 VISTA 12:33655273-34257220
CIL_0008VF CIL_0008VF_0002 VISTA 12:33664466-34267804
CIL_0007LO CIL_0007LO_0002 UCNEbase 12:33675251-34394390
CIL_0008A9 CIL_0008A9_0002 VISTA 12:33899630-34500876
CIL_0008Z7 CIL_0008Z7_0002 VISTA 12:33915261-34516362
CIL_0008Z6 CIL_0008Z6_0002 VISTA 12:33919670-34521315

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0033504 IMP floor plate development
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0048468 IMP cell development
GO:0050767 IMP regulation of neurogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092160 ferd3l Fer3-like (Drosophila) protein_coding Danio_rerio
ENSG00000146618 FERD3L Fer3-like bHLH transcription factor protein_coding Homo_sapiens

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