C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine-rich transmembrane module containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046727 Cystm1 10090 + 18:36345619-36402980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050584 Cystm1-001 36348697-36402980 protein_coding
  ENSMUST00000139727 Cystm1-003 36345619-36366720 protein_coding
  ENSMUST00000144158 Cystm1-004 36365781-36402540 protein_coding
  ENSMUST00000145439 Cystm1-002 36348763-36368255 retained_intron
  ENSMUST00000152804 Cystm1-005 36348774-36393370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050584ENSMUST00000144158ENSMUST00000152804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050584 19.605±0.95 25.870±3.91 49.053±8.13 9.772±2.83 42.152±18.86 413.986±28.79 48.791±6.27 249.591±19.82 8.583±5.01 135.995±11.92 154.131±14.67 38.700±14.56 46.342±29.22 30.013±3.72
ENSMUST00000144158 N/A 42.647±10.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.710±0.00 82.159±19.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZM CIL_0006ZM_0002 CGP 18:36345619-36454495

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120306 CYSTM1 cysteine-rich transmembrane module containing 1 protein_coding Homo_sapiens

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