C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006ZM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120306-ENSG00000113068 CGP 9606 5:140174642-140303121
GeneTranscriptPositionBiotype
ENSG00000113068 (PFDN1)
prefoldin subunit 1
ENST00000261813 (PFDN1-001) 140245039-140303121 protein_coding
ENST00000507185 (PFDN1-004) 140280960-140303086 retained_intron
ENST00000510217 (PFDN1-003) 140245125-140303113 protein_coding
ENST00000512707 (PFDN1-005) 140245347-140281535 retained_intron
ENST00000512925 (PFDN1-006) 140245552-140293207 processed_transcript
ENST00000514611 (PFDN1-002) 140245087-140300583 processed_transcript
ENST00000524074 (PFDN1-007) 140245448-140303083 protein_coding
ENSG00000120306 (CYSTM1)
cysteine-rich transmembrane module containing 1
ENST00000261811 (CYSTM1-001) 140174642-140243789 protein_coding
ENST00000504227 (CYSTM1-004) 140175188-140265830 processed_transcript
ENST00000509589 (CYSTM1-003) 140175156-140244810 processed_transcript
ENST00000509789 (CYSTM1-002) 140175188-140282052 processed_transcript
ENSG00000250069 (CTB-131B5.2)
ENST00000508713 (CTB-131B5.2-001) 140200163-140203187 sense_intronic
CIL_0006ZM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046727-ENSMUSG00000024346 CGP 10090 18:36345619-36454495
GeneTranscriptPositionBiotype
ENSMUSG00000024346 (Pfdn1)
prefoldin 1
ENSMUST00000025204 (Pfdn1-201) 36403679-36454495 protein_coding
ENSMUSG00000046727 (Cystm1)
cysteine-rich transmembrane module containing 1
ENSMUST00000050584 (Cystm1-001) 36348697-36402980 protein_coding
ENSMUST00000139727 (Cystm1-003) 36345619-36366720 protein_coding
ENSMUST00000144158 (Cystm1-004) 36365781-36402540 protein_coding
ENSMUST00000145439 (Cystm1-002) 36348763-36368255 retained_intron
ENSMUST00000152804 (Cystm1-005) 36348774-36393370 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZM_0001ENSG00000113068ENST00000261813ENST00000507185ENST00000510217ENST00000512707ENST00000512925ENST00000514611ENST00000524074ENSG00000120306ENST00000261811ENST00000504227ENST00000509589ENST00000509789ENSG00000250069ENST00000508713CIL_0006ZM_0002ENSMUSG00000024346ENSMUST00000025204ENSMUSG00000046727ENSMUST00000050584ENSMUST00000139727ENSMUST00000144158ENSMUST00000145439ENSMUST00000152804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZM_0001ENSG00000113068ENST00000261813ENST00000507185ENST00000510217ENST00000512707ENST00000524074ENSG00000120306ENST00000261811ENST00000509589ENSG00000250069ENST00000508713CIL_0006ZM_0002ENSMUSG00000024346ENSMUST00000025204ENSMUSG00000046727ENSMUST00000050584ENSMUST00000144158ENSMUST00000152804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113068 ENST00000261813 9.072±0.00 15.632±0.00 N/A 11.874±1.74 8.137±4.69 6.070±1.85 8.651±4.77 1.196±0.00 4.416±1.33 N/A 10.421±3.52 20.461±9.04 26.007±10.03 15.900±2.70
ENST00000507185 N/A N/A 2.671±0.00 N/A N/A N/A N/A 1.239±0.00 N/A N/A N/A N/A N/A N/A
ENST00000510217 11.804±0.00 10.556±0.00 N/A 9.305±0.00 N/A 13.375±0.00 17.205±0.00 0.944±0.00 N/A N/A N/A N/A 14.536±0.00 9.522±0.00
ENST00000512707 N/A 14.264±0.00 N/A 17.172±0.00 17.313±0.00 17.242±0.00 N/A N/A 7.513±0.00 N/A N/A 37.706±0.00 55.955±0.00 23.853±6.31
ENST00000512925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524074 N/A N/A 10.931±0.00 25.030±1.28 9.418±0.00 N/A 6.828±0.00 4.461±0.00 7.494±0.00 12.774±0.00 N/A 29.353±0.00 44.124±0.00 15.205±0.00
ENSG00000120306 ENST00000261811 27.794±0.00 13.355±0.00 N/A 14.178±2.62 17.560±14.09 18.429±8.56 11.295±8.91 48.063±45.75 6.724±2.48 104.950±0.00 39.850±5.42 30.993±2.22 48.565±15.36 20.575±0.00
ENST00000504227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509589 36.172±0.00 20.267±0.00 N/A N/A 41.066±0.00 35.925±0.00 N/A 65.821±63.65 17.357±0.00 195.663±0.00 57.355±0.00 N/A N/A 28.336±0.00
ENST00000509789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250069 ENST00000508713 0.161±0.00 0.505±0.00 0.728±0.00 0.201±0.05 0.299±0.04 0.312±0.17 0.196±0.04 0.252±0.08 0.439±0.35 0.442±0.36 0.357±0.32 0.251±0.17 0.072±0.00 0.667±0.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024346 ENSMUST00000025204 19.537±1.33 49.451±1.09 24.379±5.07 22.552±17.86 20.034±7.78 30.297±3.58 15.843±2.94 31.622±6.84 23.133±7.38 19.898±1.15 51.242±3.78 35.707±8.42 64.651±33.71 31.553±4.54
ENSMUSG00000046727 ENSMUST00000050584 19.605±0.95 25.870±3.91 49.053±8.13 9.772±2.83 42.152±18.86 413.986±28.79 48.791±6.27 249.591±19.82 8.583±5.01 135.995±11.92 154.131±14.67 38.700±14.56 46.342±29.22 30.013±3.72
ENSMUST00000139727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144158 N/A 42.647±10.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.710±0.00 82.159±19.52

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