C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunity-related GTPase family M member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046879 Irgm1 10090 - 11:48861968-48871683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049519 Irgm1-001 48865245-48871374 protein_coding
  ENSMUST00000097271 Irgm1-003 48866118-48871420 protein_coding
  ENSMUST00000147151 Irgm1-002 48861968-48871683 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049519ENSMUST00000097271
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049519 5.035±2.76 2.867±0.92 7.917±2.19 0.230±0.14 5.495±2.75 1.812±0.42 1.557±0.55 6.796±1.66 11.377±3.26 1.946±0.40 2.421±0.82 4.599±2.00 3.223±2.08 0.204±0.09
ENSMUST00000097271 7.909±3.07 2.143±0.58 9.186±2.96 0.694±0.67 5.557±1.19 3.981±0.60 3.280±0.24 9.637±0.89 11.806±4.48 3.800±0.54 2.125±0.42 3.955±2.28 2.600±1.17 0.331±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005783 TAS endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006914 IEA autophagy
GO:0006952 IMP defense response
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0031410 IEA cytoplasmic vesicle
GO:0042995 IEA cell projection
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000237693 IRGM immunity-related GTPase family, M protein_coding Homo_sapiens

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