C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunity-related GTPase family, M
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000237693 IRGM 9606 + 5:150846523-150900736 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000520549 IRGM-002 150848497-150900736 nonsense_mediated_decay
  ENST00000522154 IRGM-001 150846523-150848669 protein_coding
  ENST00000609660 IRGM-003 150846803-150847487 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000520549ENST00000522154ENST00000609660
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000520549 N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.319±0.00
ENST00000522154 0.090±0.00 0.109±0.00 0.087±0.00 0.047±0.00 0.160±0.00 0.043±0.00 0.072±0.00 0.025±0.00 0.044±0.01 0.190±0.00
ENST00000609660 N/A N/A N/A 0.081±0.00 0.105±0.00 N/A 0.018±0.00 N/A 0.015±0.00 0.111±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006914 IEA autophagy
GO:0006954 IEA inflammatory response
GO:0016020 IEA membrane
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0031410 IEA cytoplasmic vesicle
GO:0042995 IEA cell projection
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000046879 Irgm1 immunity-related GTPase family M member 1 protein_coding Mus_musculus
ENSMUSG00000069874 Irgm2 immunity-related GTPase family M member 2 protein_coding Mus_musculus
ENSMUSG00000078853 Igtp interferon gamma induced GTPase protein_coding Mus_musculus

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