C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: brain protein I3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047843 Bri3 10090 + 5:144244437-144446757 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056578 Bri3-001 144255234-144264574 protein_coding
  ENSMUST00000110695 Bri3-003 144244437-144264395 protein_coding
  ENSMUST00000155491 Bri3-002 144255225-144446757 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056578ENSMUST00000110695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056578 15.042±1.65 84.125±31.46 20.415±1.14 16.763±2.13 25.638±4.95 53.859±3.04 29.240±13.14 36.540±6.39 14.492±8.44 31.164±10.09 9.763±1.48 43.883±5.03 12.930±1.05 N/A
ENSMUST00000110695 41.114±6.54 N/A 58.887±4.72 58.937±34.82 28.399±7.46 N/A 69.685±4.04 62.179±9.18 14.456±3.93 59.875±1.51 15.105±1.49 76.796±65.06 72.821±58.99 105.473±14.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053B CIL_00053B_0002 CGP 5:144194442-144446757
CIL_0005L6 CIL_0005L6_0003 CGP 5:144244437-144446757

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0042802 ISO identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086332 bri3 brain protein I3 protein_coding Danio_rerio
ENSG00000164713 BRI3 brain protein I3 protein_coding Homo_sapiens

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