C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain protein I3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056578 Bri3-001 ENSMUSG00000047843 10090 + 5:144255234-144264574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000056578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000056578 15.042±1.65 84.125±31.46 20.415±1.14 16.763±2.13 25.638±4.95 53.859±3.04 29.240±13.14 36.540±6.39 14.492±8.44 31.164±10.09 9.763±1.48 43.883±5.03 12.930±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053B CIL_00053B_0002 CGP 5:144194442-144446757
CIL_0005L6 CIL_0005L6_0003 CGP 5:144244437-144446757

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0042802 ISO identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297290 BRI3-001 protein_coding Homo_sapiens 0 678
ENST00000440440 BRI3P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000456357 BRI3-004 processed_transcript Homo_sapiens 0 396
ENST00000473967 BRI3-003 processed_transcript Homo_sapiens 0 300
ENST00000474291 BRI3-002 retained_intron Homo_sapiens 0 302
ENST00000539286 BRI3-008 protein_coding Homo_sapiens 0 390

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