C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RELT-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047881 Rell1 10090 - 5:63908896-63968905 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087327 Rell1-002 63909652-63968822 nonsense_mediated_decay
  ENSMUST00000127314 Rell1-003 63960474-63968839 processed_transcript
  ENSMUST00000128967 Rell1-005 63927032-63930777 retained_intron
  ENSMUST00000154169 Rell1-001 63908896-63968905 protein_coding
  ENSMUST00000154532 Rell1-004 63924735-63930912 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087327ENSMUST00000127314ENSMUST00000154169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087327 N/A N/A N/A 3.130±0.00 N/A N/A 0.372±0.00 N/A N/A N/A 1.771±0.38 4.124±1.82 16.679±8.32 0.405±0.00
ENSMUST00000127314 N/A N/A N/A N/A N/A 44.094±7.76 N/A 6.381±0.00 5.944±1.51 N/A N/A 33.664±1.46 N/A N/A
ENSMUST00000154169 7.205±3.03 31.337±5.62 9.005±1.80 3.275±0.40 9.793±3.47 19.058±4.22 1.847±0.29 4.845±0.91 3.918±0.94 12.836±2.28 1.947±0.65 9.978±5.56 10.913±5.82 0.540±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FF CIL_0002FF_0002 CGP 5:63812495-63968905
CIL_0002FG CIL_0002FG_0002 CGP 5:63908896-64128355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0015630 IEA microtubule cytoskeleton
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018312 RELL1 RELT-like 1 protein_coding Danio_rerio
ENSG00000181826 RELL1 RELT-like 1 protein_coding Homo_sapiens

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