C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181826-ENSG00000169299 CGP 9606 4:37590800-37862937
GeneTranscriptPositionBiotype
ENSG00000154274 (C4orf19)
chromosome 4 open reading frame 19 		ENST00000284437 (C4orf19-001) 37584233-37591826 protein_coding
ENST00000381980 (C4orf19-002) 37453941-37591826 protein_coding
ENST00000508175 (C4orf19-003) 37453988-37623495 protein_coding
ENSG00000169299 (PGM2)
phosphoglucomutase 2 		ENST00000381967 (PGM2-001) 37826633-37862937 protein_coding
ENST00000505986 (PGM2-003) 37826719-37847478 nonsense_mediated_decay
ENST00000510084 (PGM2-005) 37847040-37861720 nonsense_mediated_decay
ENST00000512556 (PGM2-004) 37826721-37862013 nonsense_mediated_decay
ENST00000515668 (PGM2-002) 37826708-37847336 nonsense_mediated_decay
ENSG00000181826 (RELL1)
RELT-like 1 		ENST00000314117 (RELL1-001) 37590800-37686376 protein_coding
ENST00000454158 (RELL1-002) 37612901-37686376 protein_coding
ENST00000512114 (RELL1-003) 37634887-37665381 protein_coding
ENSG00000239532 (RP11-9D8.1)
 ENST00000493466 (RP11-9D8.1-001) 37821361-37821838 processed_pseudogene
ENSG00000273527 (AC108022.1)
 ENST00000618337 (AC108022.1-201) 37781892-37781980 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002FG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047881-ENSMUSG00000029171 CGP 10090 5:63908896-64128355
GeneTranscriptPositionBiotype
ENSMUSG00000029171 (Pgm1)
phosphoglucomutase 1 		ENSMUST00000087324 (Pgm1-001) 64092936-64128355 protein_coding
ENSMUST00000129152 (Pgm1-002) 64106441-64108317 retained_intron
ENSMUSG00000047881 (Rell1)
RELT-like 1 		ENSMUST00000087327 (Rell1-002) 63909652-63968822 nonsense_mediated_decay
ENSMUST00000127314 (Rell1-003) 63960474-63968839 processed_transcript
ENSMUST00000128967 (Rell1-005) 63927032-63930777 retained_intron
ENSMUST00000154169 (Rell1-001) 63908896-63968905 protein_coding
ENSMUST00000154532 (Rell1-004) 63924735-63930912 processed_transcript
ENSMUSG00000093780 (Gm22395)
predicted gene, 22395 		ENSMUST00000177427 (Gm22395-201) 64107407-64107502 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FG_0001ENSG00000154274ENST00000284437ENST00000381980ENST00000508175ENSG00000169299ENST00000381967ENST00000505986ENST00000510084ENST00000512556ENST00000515668ENSG00000181826ENST00000314117ENST00000454158ENST00000512114ENSG00000239532ENST00000493466ENSG00000273527ENST00000618337CIL_0002FG_0002ENSMUSG00000029171ENSMUST00000087324ENSMUST00000129152ENSMUSG00000047881ENSMUST00000087327ENSMUST00000127314ENSMUST00000128967ENSMUST00000154169ENSMUST00000154532ENSMUSG00000093780ENSMUST00000177427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FG_0001ENSG00000154274ENST00000284437ENST00000381980ENSG00000169299ENST00000381967ENST00000505986ENST00000510084ENST00000512556ENSG00000181826ENST00000314117ENST00000454158ENSG00000239532ENST00000493466ENSG00000273527ENST00000618337CIL_0002FG_0002ENSMUSG00000029171ENSMUST00000087324ENSMUST00000129152ENSMUSG00000047881ENSMUST00000087327ENSMUST00000127314ENSMUST00000154169ENSMUSG00000093780ENSMUST00000177427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154274 ENST00000284437 N/A N/A N/A N/A N/A N/A N/A N/A 1.586±0.00 N/A N/A N/A N/A N/A
ENST00000381980 N/A N/A 1.327±0.00 N/A 4.571±0.00 N/A N/A 4.109±2.75 6.132±0.00 2.803±0.00 N/A 2.138±0.00 4.867±1.34 0.329±0.00
ENST00000508175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169299 ENST00000381967 1.183±0.00 0.500±0.00 0.420±0.00 0.629±0.11 1.237±0.09 2.949±0.80 0.535±0.20 2.185±0.08 1.478±0.87 2.162±0.00 0.062±0.03 2.736±0.76 2.572±0.70 1.214±0.00
ENST00000505986 0.760±0.00 N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A
ENST00000512556 2.219±0.00 2.815±0.00 1.453±0.00 0.721±0.00 1.419±0.38 5.441±0.00 1.394±0.00 5.709±0.00 2.894±0.00 4.199±3.31 0.200±0.04 3.080±0.60 4.779±1.51 2.759±0.89
ENST00000515668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181826 ENST00000314117 N/A N/A 1.666±0.00 N/A 4.593±2.89 3.994±0.00 N/A 7.405±1.54 4.923±0.00 4.534±2.90 4.103±0.00 4.972±0.00 5.028±3.49 1.349±0.00
ENST00000454158 19.223±0.00 9.852±0.00 N/A 4.720±2.98 6.096±1.29 5.378±0.00 3.594±0.99 N/A 5.400±0.00 1.315±0.00 3.833±0.00 2.220±0.15 N/A 2.618±0.00
ENST00000512114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239532 ENST00000493466 0.029±0.00 0.331±0.00 N/A 0.091±0.00 0.239±0.00 0.251±0.00 0.028±0.00 0.090±0.00 0.054±0.00 0.202±0.00 0.163±0.00 0.137±0.04 N/A 0.192±0.10
ENSG00000273527 ENST00000618337 N/A 0.763±0.00 N/A 0.846±0.00 1.606±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029171 ENSMUST00000087324 4.388±2.27 1.952±0.62 13.686±0.03 4.866±3.25 3.979±1.45 16.076±2.15 1.358±0.07 3.370±0.43 4.371±3.36 5.310±0.85 0.428±0.25 5.447±4.10 19.374±13.73 0.373±0.14
ENSMUST00000129152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.935±4.94 N/A
ENSMUSG00000047881 ENSMUST00000087327 N/A N/A N/A 3.130±0.00 N/A N/A 0.372±0.00 N/A N/A N/A 1.771±0.38 4.124±1.82 16.679±8.32 0.405±0.00
ENSMUST00000127314 N/A N/A N/A N/A N/A 44.094±7.76 N/A 6.381±0.00 5.944±1.51 N/A N/A 33.664±1.46 N/A N/A
ENSMUST00000128967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154169 7.205±3.03 31.337±5.62 9.005±1.80 3.275±0.40 9.793±3.47 19.058±4.22 1.847±0.29 4.845±0.91 3.918±0.94 12.836±2.28 1.947±0.65 9.978±5.56 10.913±5.82 0.540±0.21
ENSMUST00000154532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093780 ENSMUST00000177427 N/A N/A N/A N/A 5756.730±0.00 N/A N/A N/A N/A 2764.200±0.00 N/A 28.816±0.00 N/A 3007.590±0.00

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