C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047909 Ankrd16 10090 + 2:11777876-11790325 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056108 Ankrd16-001 11778491-11790325 protein_coding
  ENSMUST00000125024 Ankrd16-004 11778527-11790303 retained_intron
  ENSMUST00000128774 Ankrd16-010 11784320-11790296 nonsense_mediated_decay
  ENSMUST00000130186 Ankrd16-007 11777876-11778859 processed_transcript
  ENSMUST00000133664 Ankrd16-008 11781477-11789768 nonsense_mediated_decay
  ENSMUST00000142622 Ankrd16-011 11786158-11790122 retained_intron
  ENSMUST00000145547 Ankrd16-009 11783309-11790052 retained_intron
  ENSMUST00000148498 Ankrd16-005 11784205-11790301 retained_intron
  ENSMUST00000150213 Ankrd16-002 11778530-11790325 retained_intron
  ENSMUST00000150320 Ankrd16-003 11778573-11781264 retained_intron
  ENSMUST00000156067 Ankrd16-006 11778564-11790305 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056108ENSMUST00000125024ENSMUST00000130186ENSMUST00000145547ENSMUST00000148498ENSMUST00000150213ENSMUST00000150320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056108 8.218±1.83 6.593±1.15 8.615±2.21 8.086±0.00 8.300±1.37 6.777±1.75 3.045±0.88 6.368±1.66 3.685±1.14 6.316±2.08 2.708±0.56 11.108±2.57 3.043±0.22 2.520±0.38
ENSMUST00000125024 2.914±0.45 N/A 4.880±0.32 4.053±0.49 3.429±0.74 3.142±0.49 0.933±0.15 1.540±0.00 1.723±0.24 2.610±0.48 N/A 3.741±1.22 2.818±1.01 0.985±0.17
ENSMUST00000130186 N/A 9.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.169±1.03 N/A N/A
ENSMUST00000145547 10.879±1.71 8.808±0.31 16.921±3.61 13.718±2.62 10.570±2.67 10.283±1.85 2.588±0.95 8.196±1.64 5.691±1.74 7.847±0.99 N/A 13.130±2.61 5.847±0.00 3.104±0.42
ENSMUST00000148498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.838±0.98 N/A N/A N/A
ENSMUST00000150213 2.813±0.00 N/A 6.546±1.56 9.612±4.64 2.792±0.00 2.986±0.71 N/A 2.544±0.63 2.714±0.68 2.510±0.23 0.813±0.00 7.258±2.90 3.364±0.41 0.979±0.26
ENSMUST00000150320 4.975±0.00 N/A N/A 8.087±0.72 3.825±0.00 N/A 1.521±0.25 N/A 2.625±0.10 3.679±0.33 1.324±0.33 N/A 2.708±0.07 1.789±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088I CIL_00088I_0002 VISTA 2:11765185-12368019

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003822 ankrd16 ankyrin repeat domain 16 protein_coding Danio_rerio
ENSG00000134461 ANKRD16 ankyrin repeat domain 16 protein_coding Homo_sapiens

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