C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MCM (minichromosome maintenance deficient) binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048170 Mcmbp 10090 - 7:128696441-128740495 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057557 Mcmbp-001 128696441-128740495 protein_coding
  ENSMUST00000119081 Mcmbp-002 128697767-128740486 protein_coding
  ENSMUST00000127807 Mcmbp-004 128699323-128702837 retained_intron
  ENSMUST00000140714 Mcmbp-005 128698187-128699219 processed_transcript
  ENSMUST00000146352 Mcmbp-003 128712611-128714858 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057557ENSMUST00000119081
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057557 7.474±4.60 4.439±1.45 4.049±1.15 6.768±3.72 7.071±3.05 14.634±2.07 3.438±1.79 6.337±2.48 4.010±1.71 11.802±1.29 1.895±0.52 10.981±4.49 4.181±1.47 2.526±1.10
ENSMUST00000119081 7.190±3.49 8.344±2.24 2.510±0.00 4.564±1.04 10.177±6.21 8.846±4.43 3.321±1.41 3.543±1.48 3.357±1.85 6.379±1.25 1.911±0.61 12.842±2.52 10.317±4.28 2.190±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047H CIL_00047H_0003 CGP 7:128611328-128740495
CIL_00047E CIL_00047E_0003 CGP 7:128696441-128784836

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006261 ISS DNA-dependent DNA replication
GO:0007062 ISS sister chromatid cohesion
GO:0007067 IEA mitotic nuclear division
GO:0042555 ISS MCM complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055314 mcmbp minichromosome maintenance complex binding protein protein_coding Danio_rerio
ENSG00000197771 MCMBP minichromosome maintenance complex binding protein protein_coding Homo_sapiens

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