C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061437-ENSDARG00000055314 CGP 7955 13:25729470-25772772
GeneTranscriptPositionBiotype
ENSDARG00000055314 (mcmbp)
minichromosome maintenance complex binding protein 		ENSDART00000077655 (mcmbp-201) 25758933-25772772 protein_coding
ENSDART00000133970 (mcmbp-003) 25770775-25772711 retained_intron
ENSDART00000135712 (mcmbp-002) 25769566-25772504 processed_transcript
ENSDART00000135788 (mcmbp-001) 25758874-25772772 protein_coding
ENSDART00000143853 (mcmbp-004) 25759103-25764576 retained_intron
ENSDARG00000061437 (inpp5f)
inositol polyphosphate-5-phosphatase F 		ENSDART00000087604 (inpp5f-201) 25729470-25756377 protein_coding
ENSDART00000140634 (inpp5f-001) 25729470-25756377 protein_coding
CIL_00047H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198825-ENSG00000197771 CGP 9606 10:119726097-119892556
GeneTranscriptPositionBiotype
ENSG00000197771 (MCMBP)
minichromosome maintenance complex binding protein 		ENST00000360003 (MCMBP-002) 119829404-119872754 protein_coding
ENST00000369077 (MCMBP-001) 119831197-119872849 protein_coding
ENST00000466047 (MCMBP-003) 119831201-119873621 processed_transcript
ENST00000495407 (MCMBP-004) 119842782-119858237 processed_transcript
ENST00000569515 (MCMBP-005) 119859050-119892556 processed_transcript
ENSG00000198825 (INPP5F)
inositol polyphosphate-5-phosphatase F 		ENST00000361976 (INPP5F-001) 119726097-119829278 protein_coding
ENST00000369080 (INPP5F-002) 119818716-119828325 protein_coding
ENST00000369081 (INPP5F-004) 119781627-119792205 protein_coding
ENST00000490818 (INPP5F-003) 119819507-119823897 processed_transcript
ENSG00000242818 (RN7SL846P)
RNA, 7SL, cytoplasmic 846, pseudogene 		ENST00000467429 (RN7SL846P-201) 119768247-119768538 misc_RNA
ENSG00000270300 (PHACTR2P1)
phosphatase and actin regulator 2 pseudogene 1 		ENST00000605639 (PHACTR2P1-001) 119815229-119816642 processed_pseudogene
CIL_00047H_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042105-ENSMUSG00000048170 CGP 10090 7:128611328-128740495
GeneTranscriptPositionBiotype
ENSMUSG00000042105 (Inpp5f)
inositol polyphosphate-5-phosphatase F 		ENSMUST00000043138 (Inpp5f-001) 128611360-128696425 protein_coding
ENSMUST00000098007 (Inpp5f-002) 128611328-128671622 protein_coding
ENSMUST00000118605 (Inpp5f-006) 128688489-128696274 protein_coding
ENSMUST00000129085 (Inpp5f-003) 128659008-128677477 retained_intron
ENSMUST00000130789 (Inpp5f-008) 128667691-128668776 retained_intron
ENSMUST00000142075 (Inpp5f-004) 128679686-128696274 processed_transcript
ENSMUST00000148815 (Inpp5f-007) 128663680-128668571 processed_transcript
ENSMUST00000151237 (Inpp5f-005) 128687546-128696359 processed_transcript
ENSMUSG00000048170 (Mcmbp)
MCM (minichromosome maintenance deficient) binding protein 		ENSMUST00000057557 (Mcmbp-001) 128696441-128740495 protein_coding
ENSMUST00000119081 (Mcmbp-002) 128697767-128740486 protein_coding
ENSMUST00000127807 (Mcmbp-004) 128699323-128702837 retained_intron
ENSMUST00000140714 (Mcmbp-005) 128698187-128699219 processed_transcript
ENSMUST00000146352 (Mcmbp-003) 128712611-128714858 retained_intron
ENSMUSG00000081339 (Gm16044)
predicted gene 16044 		ENSMUST00000118475 (Gm16044-001) 128692689-128693138 processed_pseudogene
ENSMUSG00000088566 (Gm23783)
predicted gene, 23783 		ENSMUST00000157941 (Gm23783-201) 128734202-128734303 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047H_0001ENSDARG00000055314ENSDART00000077655ENSDART00000133970ENSDART00000135712ENSDART00000135788ENSDART00000143853ENSDARG00000061437ENSDART00000087604ENSDART00000140634CIL_00047H_0002ENSG00000197771ENST00000360003ENST00000369077ENST00000466047ENST00000495407ENST00000569515ENSG00000198825ENST00000361976ENST00000369080ENST00000369081ENST00000490818ENSG00000242818ENST00000467429ENSG00000270300ENST00000605639CIL_00047H_0003ENSMUSG00000042105ENSMUST00000043138ENSMUST00000098007ENSMUST00000118605ENSMUST00000129085ENSMUST00000130789ENSMUST00000142075ENSMUST00000148815ENSMUST00000151237ENSMUSG00000048170ENSMUST00000057557ENSMUST00000119081ENSMUST00000127807ENSMUST00000140714ENSMUST00000146352ENSMUSG00000081339ENSMUST00000118475ENSMUSG00000088566ENSMUST00000157941
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047H_0001ENSDARG00000055314ENSDART00000077655ENSDART00000135788ENSDARG00000061437ENSDART00000087604ENSDART00000140634CIL_00047H_0002ENSG00000197771ENST00000360003ENST00000369077ENST00000466047ENSG00000198825ENST00000361976ENST00000369080ENSG00000242818ENST00000467429ENSG00000270300ENST00000605639CIL_00047H_0003ENSMUSG00000042105ENSMUST00000043138ENSMUST00000098007ENSMUST00000118605ENSMUST00000142075ENSMUST00000151237ENSMUSG00000048170ENSMUST00000057557ENSMUST00000119081ENSMUSG00000081339ENSMUST00000118475ENSMUSG00000088566ENSMUST00000157941
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055314 ENSDART00000077655 N/A N/A N/A 0.966±0.00 N/A N/A 4.893±0.00 3.030±0.06 0.780±0.00 N/A 1.034±0.00 N/A N/A N/A
ENSDART00000133970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135788 N/A N/A N/A 1.786±0.00 N/A N/A 3.481±1.51 7.555±6.73 1.162±0.00 N/A N/A N/A N/A N/A
ENSDART00000143853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061437 ENSDART00000087604 N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A 1.025±0.00 N/A N/A N/A
ENSDART00000140634 N/A N/A N/A N/A N/A N/A 0.522±0.14 N/A 0.316±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197771 ENST00000360003 N/A 2.941±0.00 N/A 3.375±0.00 N/A 1.684±0.00 N/A N/A 1.214±0.62 1.445±0.00 1.835±1.20 2.901±0.42 2.772±0.68 2.637±0.00
ENST00000369077 10.873±0.00 4.344±0.00 N/A 2.907±1.24 4.751±0.07 5.207±1.61 3.718±1.73 4.812±0.97 2.635±0.69 8.452±5.34 5.160±3.26 7.737±0.72 8.084±3.30 6.200±2.84
ENST00000466047 N/A N/A 0.677±0.00 N/A N/A N/A N/A N/A 1.379±0.00 N/A N/A 13.520±0.00 9.690±0.00 7.852±0.00
ENST00000495407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198825 ENST00000361976 1.519±0.00 2.883±0.00 0.837±0.00 5.379±0.00 1.537±0.97 1.318±0.22 0.689±0.33 1.217±0.53 1.141±0.95 1.657±0.00 1.465±0.00 3.161±1.25 1.115±0.59 1.745±0.37
ENST00000369080 N/A N/A N/A N/A N/A 0.658±0.00 N/A N/A N/A N/A 0.878±0.00 2.371±0.00 1.547±0.00 1.825±0.00
ENST00000369081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242818 ENST00000467429 0.065±0.00 N/A N/A 0.180±0.00 2.673±0.00 N/A N/A N/A N/A 1.845±0.00 N/A 0.137±0.00 N/A N/A
ENSG00000270300 ENST00000605639 0.019±0.00 0.385±0.00 0.265±0.00 0.351±0.00 0.216±0.10 0.246±0.00 0.026±0.00 N/A 0.133±0.00 0.017±0.00 0.288±0.00 0.075±0.02 N/A 0.212±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042105 ENSMUST00000043138 2.388±1.00 2.063±1.26 2.662±0.11 5.656±0.00 2.019±0.63 1.746±0.36 0.833±0.39 7.101±1.02 2.407±0.87 2.675±0.92 0.513±0.16 2.915±1.13 3.815±1.25 0.539±0.24
ENSMUST00000098007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.594±0.70 N/A 0.462±0.00
ENSMUST00000118605 N/A N/A N/A 22.408±8.15 0.975±0.11 N/A N/A N/A N/A N/A 0.213±0.00 0.700±0.00 N/A 0.202±0.07
ENSMUST00000129085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142075 1.899±0.49 3.535±0.79 1.637±0.23 N/A 2.167±0.83 1.466±0.34 0.597±0.02 3.135±0.66 1.693±0.72 2.038±0.61 0.449±0.00 3.298±1.32 3.202±0.43 0.304±0.12
ENSMUST00000148815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151237 N/A N/A 2.923±0.00 24.990±15.90 3.670±0.00 N/A 0.501±0.13 N/A 1.491±0.14 N/A 0.647±0.36 1.664±0.00 1.647±0.48 N/A
ENSMUSG00000048170 ENSMUST00000057557 7.474±4.60 4.439±1.45 4.049±1.15 6.768±3.72 7.071±3.05 14.634±2.07 3.438±1.79 6.337±2.48 4.010±1.71 11.802±1.29 1.895±0.52 10.981±4.49 4.181±1.47 2.526±1.10
ENSMUST00000119081 7.190±3.49 8.344±2.24 2.510±0.00 4.564±1.04 10.177±6.21 8.846±4.43 3.321±1.41 3.543±1.48 3.357±1.85 6.379±1.25 1.911±0.61 12.842±2.52 10.317±4.28 2.190±0.33
ENSMUST00000127807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081339 ENSMUST00000118475 0.252±0.08 0.196±0.00 0.209±0.02 1.443±0.50 0.322±0.16 N/A 0.430±0.00 0.389±0.14 0.100±0.04 0.181±0.05 0.149±0.05 0.492±0.35 0.200±0.06 N/A
ENSMUSG00000088566 ENSMUST00000157941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.163±0.00 N/A

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