C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adhesion molecule, interacts with CXADR antigen 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048534 Amica1 10090 + 9:45079183-45108530 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050020 Amica1-001 45079183-45108530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050020
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050020 0.222±0.08 0.105±0.03 0.397±0.17 0.050±0.04 0.786±0.30 0.219±0.10 0.030±0.01 0.128±0.10 0.077±0.06 0.391±0.18 0.111±0.08 0.242±0.15 0.191±0.12 0.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 IEA integrin binding
GO:0005886 IDA plasma membrane
GO:0005923 ISS tight junction
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0030593 IEA neutrophil chemotaxis
GO:0035696 ISS monocyte extravasation
GO:0042803 ISS protein homodimerization activity
GO:0046629 IDA gamma-delta T cell activation
GO:0050839 IEA cell adhesion molecule binding
GO:0060054 IDA positive regulation of epithelial cell proliferation involved in wound healing
GO:0072672 IEA neutrophil extravasation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000160593 AMICA1 adhesion molecule, interacts with CXADR antigen 1 protein_coding Homo_sapiens

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