C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retbindin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048617 Rtbdn 10090 + 8:84946991-84956603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067472 Rtbdn-001 84946991-84956603 protein_coding
  ENSMUST00000109740 Rtbdn-002 84946991-84956603 protein_coding
  ENSMUST00000121880 Rtbdn-004 84949860-84956603 protein_coding
  ENSMUST00000152378 Rtbdn-003 84951181-84956511 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067472ENSMUST00000109740ENSMUST00000121880ENSMUST00000152378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067472 N/A N/A N/A 0.638±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109740 N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121880 0.052±0.00 0.131±0.05 0.078±0.01 1.886±0.23 0.034±0.01 0.232±0.16 0.019±0.00 0.022±0.00 0.214±0.14 0.029±0.01 0.156±0.07 0.181±0.19 0.114±0.05 0.198±0.07
ENSMUST00000152378 N/A N/A 0.007±0.00 0.202±0.00 N/A N/A N/A N/A 0.030±0.02 N/A N/A N/A N/A 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132026 RTBDN retbindin protein_coding Homo_sapiens

Loading