C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4732456N10 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048699 4732456N10Rik 10090 - 15:101552356-101562950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023714 4732456N10Rik-001 101552356-101562950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungOvaryPlacentaENSMUST00000023714
Transcript ID Adipose Brain Breast Colon Heart Lung Ovary Placenta
ENSMUST00000023714 0.359±0.07 0.040±0.00 0.020±0.01 0.039±0.00 0.024±0.01 0.065±0.05 0.194±0.08 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000V CGP 15:101541229-101562950
CIL_00033Q CIL_00033Q_000U CGP 15:101552356-101573904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio

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