C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gametogenetin binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048731 Ggnbp1 10090 + 17:26973217-27036378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053683 Ggnbp1-001 27029259-27036378 protein_coding
  ENSMUST00000122106 Ggnbp1-003 27018024-27036378 protein_coding
  ENSMUST00000133257 Ggnbp1-002 26973217-27036378 protein_coding
  ENSMUST00000142141 Ggnbp1-006 27018040-27022517 processed_transcript
  ENSMUST00000151920 Ggnbp1-007 27018013-27026693 retained_intron
  ENSMUST00000154731 Ggnbp1-005 27030404-27034809 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderHeartKidneyMuscleOvaryTestisENSMUST00000053683ENSMUST00000133257ENSMUST00000142141ENSMUST00000151920
Transcript ID Adrenal Bladder Heart Kidney Muscle Ovary Testis
ENSMUST00000053683 N/A 9.380±0.00 N/A 14.842±0.00 5.146±0.00 N/A 286.659±37.18
ENSMUST00000133257 7.207±1.42 N/A 3.203±0.00 N/A N/A 3.366±0.43 N/A
ENSMUST00000142141 N/A N/A 54.834±9.83 46.846±4.04 44.250±3.40 N/A N/A
ENSMUST00000151920 N/A N/A 7.460±0.00 N/A 3.978±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643
CIL_0008HF CIL_0008HF_0002 VISTA 17:26563571-27166666
CIL_000254 CIL_000254_0002 CGP 17:26941452-26976205

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000266 IDA mitochondrial fission
GO:0005515 IPI protein binding
GO:0005758 IDA mitochondrial intermembrane space
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

No Homologs available.

Loading