C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000254_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197283-ENSG00000213588 CGP 9606 6:33420070-33457548
GeneTranscriptPositionBiotype
ENSG00000213588 (ZBTB9)
zinc finger and BTB domain containing 9 		ENST00000395064 (ZBTB9-001) 33454579-33457548 protein_coding
ENST00000612407 (ZBTB9-004) 33455406-33456190 protein_coding
ENST00000612775 (ZBTB9-002) 33453970-33455337 protein_coding
ENST00000621915 (ZBTB9-003) 33454543-33455515 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000254_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067629-ENSMUSG00000079605 CGP 10090 17:26941452-26976205
GeneTranscriptPositionBiotype
ENSMUSG00000048731 (Ggnbp1)
gametogenetin binding protein 1 		ENSMUST00000053683 (Ggnbp1-001) 27029259-27036378 protein_coding
ENSMUST00000122106 (Ggnbp1-003) 27018024-27036378 protein_coding
ENSMUST00000133257 (Ggnbp1-002) 26973217-27036378 protein_coding
ENSMUST00000142141 (Ggnbp1-006) 27018040-27022517 processed_transcript
ENSMUST00000151920 (Ggnbp1-007) 27018013-27026693 retained_intron
ENSMUST00000154731 (Ggnbp1-005) 27030404-27034809 retained_intron
ENSMUSG00000067629 (Syngap1)
synaptic Ras GTPase activating protein 1 homolog (rat) 		ENSMUST00000081285 (Syngap1-201) 26941452-26970645 protein_coding
ENSMUST00000177932 (Syngap1-202) 26941452-26970541 protein_coding
ENSMUSG00000079605 (Zbtb9)
zinc finger and BTB domain containing 9 		ENSMUST00000120016 (Zbtb9-001) 26973167-26976205 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000254_0001ENSG00000213588ENST00000395064ENST00000612407ENST00000612775ENST00000621915CIL_000254_0002ENSMUSG00000048731ENSMUST00000053683ENSMUST00000122106ENSMUST00000133257ENSMUST00000142141ENSMUST00000151920ENSMUST00000154731ENSMUSG00000067629ENSMUST00000081285ENSMUST00000177932ENSMUSG00000079605ENSMUST00000120016
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000254_0001ENSG00000213588ENST00000395064ENST00000612407CIL_000254_0002ENSMUSG00000048731ENSMUST00000053683ENSMUST00000133257ENSMUST00000142141ENSMUST00000151920ENSMUSG00000067629ENSMUST00000081285ENSMUST00000177932ENSMUSG00000079605ENSMUST00000120016
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213588 ENST00000395064 0.923±0.00 3.493±0.00 0.046±0.00 1.758±1.18 1.395±1.26 N/A 0.522±0.38 3.215±0.00 1.220±0.00 0.093±0.00 0.563±0.38 5.341±2.80 2.909±0.76 3.289±1.45
ENST00000612407 1.382±0.00 N/A N/A N/A N/A N/A N/A 2.275±0.00 N/A 0.952±0.00 1.220±0.00 N/A N/A N/A
ENST00000612775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048731 ENSMUST00000053683 N/A N/A 9.380±0.00 N/A N/A N/A N/A 14.842±0.00 N/A N/A 5.146±0.00 N/A N/A 286.659±37.18
ENSMUST00000122106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133257 N/A 7.207±1.42 N/A N/A N/A N/A 3.203±0.00 N/A N/A N/A N/A 3.366±0.43 N/A N/A
ENSMUST00000142141 N/A N/A N/A N/A N/A N/A 54.834±9.83 46.846±4.04 N/A N/A 44.250±3.40 N/A N/A N/A
ENSMUST00000151920 N/A N/A N/A N/A N/A N/A 7.460±0.00 N/A N/A N/A 3.978±0.00 N/A N/A N/A
ENSMUST00000154731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067629 ENSMUST00000081285 N/A N/A N/A 17.813±1.27 N/A N/A N/A N/A N/A N/A 0.132±0.00 3.359±0.00 N/A 4.795±0.72
ENSMUST00000177932 N/A 1.866±0.32 N/A 22.597±0.00 N/A 0.811±0.00 N/A N/A 0.135±0.00 N/A 0.118±0.03 3.896±0.75 0.299±0.00 11.309±1.96
ENSMUSG00000079605 ENSMUST00000120016 8.995±3.68 10.175±2.16 6.126±0.42 4.998±1.95 11.903±5.26 9.249±1.54 3.922±0.46 8.397±2.91 5.000±0.70 12.029±1.62 N/A 11.599±4.71 4.361±0.70 9.494±0.00

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