C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 110, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049119 Fam110b 10090 + 4:5644090-6108223 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054857 Fam110b-001 5644121-5801101 protein_coding
  ENSMUST00000108380 Fam110b-002 5724312-5801101 protein_coding
  ENSMUST00000124256 Fam110b-005 5644090-5798382 processed_transcript
  ENSMUST00000126564 Fam110b-004 5644235-6108223 processed_transcript
  ENSMUST00000141479 Fam110b-006 5644190-5798494 processed_transcript
  ENSMUST00000144605 Fam110b-003 5644125-5733523 retained_intron
  ENSMUST00000145365 Fam110b-008 5798084-5798531 processed_transcript
  ENSMUST00000156582 Fam110b-007 5772879-5798845 protein_coding
  ENSMUST00000171403 Fam110b-201 5772879-5799946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054857ENSMUST00000108380ENSMUST00000124256ENSMUST00000171403
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054857 1.329±0.96 1.445±0.39 0.977±0.13 3.899±2.14 0.669±0.11 0.932±0.25 0.315±0.09 0.417±0.22 0.122±0.05 0.537±0.17 0.317±0.10 2.759±1.59 0.943±0.19 0.525±0.19
ENSMUST00000108380 N/A N/A N/A 2.659±1.27 N/A N/A 0.569±0.21 0.269±0.06 0.125±0.02 N/A 0.470±0.15 0.660±0.00 N/A N/A
ENSMUST00000124256 N/A 2.570±1.01 N/A N/A 1.141±0.00 1.559±0.00 N/A N/A 0.145±0.06 N/A N/A 5.183±1.15 N/A N/A
ENSMUST00000171403 3.118±1.75 2.091±0.34 2.661±0.44 24.257±2.79 2.060±0.76 2.628±0.61 1.261±0.47 1.061±0.31 0.307±0.19 1.634±0.16 0.538±0.17 5.978±2.37 5.839±2.35 1.960±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TL CIL_0001TL_0002 CGP 4:4762484-6108223
CIL_0007X3 CIL_0007X3_0002 VISTA 4:5496827-6100336
CIL_0003J1 CIL_0003J1_0002 CGP 4:5644090-6221688

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088073 fam110b family with sequence similarity 110, member B protein_coding Danio_rerio
ENSG00000169122 FAM110B family with sequence similarity 110, member B protein_coding Homo_sapiens

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