C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104331-ENSG00000169122 CGP 9606 8:56957933-58204279
GeneTranscriptPositionBiotype
ENSG00000104331 (IMPAD1)
inositol monophosphatase domain containing 1 		ENST00000262644 (IMPAD1-001) 56957933-56993844 protein_coding
ENST00000517461 (IMPAD1-002) 56964133-56993360 protein_coding
ENST00000520392 (IMPAD1-003) 56963926-56980112 nonsense_mediated_decay
ENSG00000169122 (FAM110B)
family with sequence similarity 110, member B 		ENST00000361488 (FAM110B-001) 57994554-58148788 protein_coding
ENST00000518427 (FAM110B-008) 58070207-58075623 processed_transcript
ENST00000519262 (FAM110B-006) 57994509-58145999 processed_transcript
ENST00000520369 (FAM110B-007) 57994568-58204279 processed_transcript
ENST00000521413 (FAM110B-009) 58070318-58146037 processed_transcript
ENST00000522059 (FAM110B-003) 58031616-58146040 processed_transcript
ENST00000523486 (FAM110B-004) 58070227-58198092 processed_transcript
ENSG00000205293 (RP11-1112C15.1)
 ENST00000522992 (RP11-1112C15.1-001) 57978358-57984126 lincRNA
ENSG00000215117 (LINC00588)
long intergenic non-protein coding RNA 588 		ENST00000521663 (LINC00588-001) 57279543-57284731 lincRNA
ENSG00000220984 (AC025674.1)
 ENST00000408057 (AC025674.1-201) 57183634-57183720 miRNA
ENSG00000242595 (RP11-648L3.1)
 ENST00000480251 (RP11-648L3.1-001) 58113189-58113622 processed_pseudogene
ENSG00000253116 (RP11-648L3.2)
 ENST00000518536 (RP11-648L3.2-001) 58091442-58106294 lincRNA
ENSG00000253301 (RP11-513O17.2)
 ENST00000517611 (RP11-513O17.2-008) 57219379-57220738 lincRNA
ENST00000518556 (RP11-513O17.2-004) 57193594-57203168 lincRNA
ENST00000519160 (RP11-513O17.2-005) 57219089-57232636 lincRNA
ENST00000519241 (RP11-513O17.2-001) 57142703-57219442 lincRNA
ENST00000519314 (RP11-513O17.2-002) 57142689-57201088 lincRNA
ENST00000520929 (RP11-513O17.2-009) 57218276-57219567 lincRNA
ENST00000521132 (RP11-513O17.2-007) 57218534-57220236 lincRNA
ENST00000521653 (RP11-513O17.2-003) 57193590-57208632 lincRNA
ENST00000523341 (RP11-513O17.2-006) 57193620-57240298 lincRNA
ENSG00000253376 (RP11-44D19.1)
 ENST00000522281 (RP11-44D19.1-001) 57889576-57890809 lincRNA
ENSG00000253614 (RP11-513O17.3)
 ENST00000522622 (RP11-513O17.3-001) 57261226-57266613 lincRNA
ENSG00000253821 (RP11-246K15.1)
 ENST00000520370 (RP11-246K15.1-001) 57492884-57545943 lincRNA
ENST00000520881 (RP11-246K15.1-002) 57492899-57591559 lincRNA
ENSG00000253871 (RP11-756K15.2)
 ENST00000519714 (RP11-756K15.2-001) 57343787-57364857 lincRNA
ENST00000521446 (RP11-756K15.2-002) 57343807-57346843 lincRNA
ENSG00000254139 (CTD-2339F6.1)
 ENST00000518934 (CTD-2339F6.1-001) 57746149-57750199 lincRNA
CIL_0001TL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066324-ENSMUSG00000049119 CGP 10090 4:4762484-6108223
GeneTranscriptPositionBiotype
ENSMUSG00000049119 (Fam110b)
family with sequence similarity 110, member B 		ENSMUST00000054857 (Fam110b-001) 5644121-5801101 protein_coding
ENSMUST00000108380 (Fam110b-002) 5724312-5801101 protein_coding
ENSMUST00000124256 (Fam110b-005) 5644090-5798382 processed_transcript
ENSMUST00000126564 (Fam110b-004) 5644235-6108223 processed_transcript
ENSMUST00000141479 (Fam110b-006) 5644190-5798494 processed_transcript
ENSMUST00000144605 (Fam110b-003) 5644125-5733523 retained_intron
ENSMUST00000145365 (Fam110b-008) 5798084-5798531 processed_transcript
ENSMUST00000156582 (Fam110b-007) 5772879-5798845 protein_coding
ENSMUST00000171403 (Fam110b-201) 5772879-5799946 protein_coding
ENSMUSG00000066324 (Impad1)
inositol monophosphatase domain containing 1 		ENSMUST00000084949 (Impad1-001) 4762484-4793355 protein_coding
ENSMUSG00000083228 (Gm11779)
predicted gene 11779 		ENSMUST00000118541 (Gm11779-001) 4978507-4978874 processed_pseudogene
ENSMUSG00000083232 (Gm11796)
predicted gene 11796 		ENSMUST00000120208 (Gm11796-001) 5854516-5855487 processed_pseudogene
ENSMUSG00000084360 (Gm11797)
predicted gene 11797 		ENSMUST00000121336 (Gm11797-001) 6069874-6070627 processed_pseudogene
ENSMUSG00000086066 (4930423M02Rik)
RIKEN cDNA 4930423M02 gene 		ENSMUST00000130895 (4930423M02Rik-002) 5632336-5641757 lincRNA
ENSMUST00000156903 (4930423M02Rik-001) 5632328-5642284 lincRNA
ENSMUSG00000087099 (Gm11782)
predicted gene 11782 		ENSMUST00000131675 (Gm11782-001) 5545238-5551223 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104331 ENST00000262644 11.797±0.00 8.828±0.00 4.527±0.00 13.924±1.80 17.622±10.32 5.777±0.81 8.928±3.02 9.276±1.87 10.120±1.16 7.343±0.44 9.224±7.54 5.568±1.92 8.038±0.85 8.767±2.63
ENST00000517461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169122 ENST00000361488 N/A 0.266±0.00 0.154±0.00 N/A N/A 0.063±0.00 4.796±0.00 N/A 0.124±0.00 0.080±0.00 N/A 1.744±1.17 N/A 3.353±0.70
ENST00000518427 N/A N/A 2.303±0.00 N/A N/A N/A 10.452±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000519262 N/A N/A N/A N/A N/A N/A N/A N/A 1.534±0.00 N/A N/A N/A N/A N/A
ENST00000520369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522059 N/A N/A N/A N/A N/A 2.280±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205293 ENST00000522992 0.033±0.00 0.157±0.00 N/A 0.118±0.00 0.112±0.00 0.068±0.00 0.030±0.00 0.017±0.00 0.049±0.00 0.096±0.00 N/A 0.048±0.01 0.321±0.21 0.067±0.04
ENSG00000215117 ENST00000521663 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.496±0.00
ENSG00000220984 ENST00000408057 2.157±0.00 5.286±0.00 N/A 4.147±0.00 5.182±0.00 0.352±0.00 0.373±0.00 2.726±0.00 0.715±0.00 N/A 3.640±0.00 1.493±0.00 N/A 1.376±0.01
ENSG00000242595 ENST00000480251 0.210±0.00 N/A N/A N/A 0.160±0.00 N/A 0.633±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253116 ENST00000518536 0.069±0.00 0.294±0.00 N/A 0.202±0.00 0.025±0.00 N/A 0.158±0.00 0.147±0.00 N/A 0.373±0.28 N/A N/A N/A 0.022±0.00
ENSG00000253301 ENST00000517611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 46.514±0.00
ENST00000518556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519160 N/A 0.021±0.00 1.947±0.00 0.013±0.00 N/A N/A 0.004±0.00 0.644±0.00 0.019±0.00 0.004±0.00 N/A 0.014±0.00 0.015±0.00 7.177±6.44
ENST00000519241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A
ENST00000519314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520929 N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A
ENST00000521653 N/A 0.038±0.00 N/A 0.042±0.00 0.082±0.00 N/A N/A 2.525±0.00 N/A N/A N/A N/A 0.038±0.00 23.116±18.28
ENST00000523341 N/A N/A N/A 0.064±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A 3.837±0.00
ENSG00000253376 ENST00000522281 0.045±0.00 0.015±0.00 N/A 0.030±0.00 0.056±0.00 N/A 0.014±0.00 0.071±0.00 N/A 0.149±0.00 N/A 0.018±0.00 N/A 0.140±0.01
ENSG00000253614 ENST00000522622 0.020±0.00 0.113±0.00 N/A 0.016±0.00 0.026±0.00 N/A 0.003±0.00 0.015±0.00 N/A 0.020±0.00 0.008±0.00 0.002±0.00 N/A 0.177±0.07
ENSG00000253821 ENST00000520370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.18 0.145±0.00
ENST00000520881 N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A 1.333±0.00 N/A
ENSG00000253871 ENST00000519714 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A 0.785±0.43
ENST00000521446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254139 ENST00000518934 0.028±0.00 0.046±0.00 N/A 0.125±0.01 0.018±0.00 0.008±0.00 0.069±0.03 N/A 0.012±0.00 0.126±0.00 0.142±0.00 0.011±0.00 0.089±0.06 0.036±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049119 ENSMUST00000054857 1.329±0.96 1.445±0.39 0.977±0.13 3.899±2.14 0.669±0.11 0.932±0.25 0.315±0.09 0.417±0.22 0.122±0.05 0.537±0.17 0.317±0.10 2.759±1.59 0.943±0.19 0.525±0.19
ENSMUST00000108380 N/A N/A N/A 2.659±1.27 N/A N/A 0.569±0.21 0.269±0.06 0.125±0.02 N/A 0.470±0.15 0.660±0.00 N/A N/A
ENSMUST00000124256 N/A 2.570±1.01 N/A N/A 1.141±0.00 1.559±0.00 N/A N/A 0.145±0.06 N/A N/A 5.183±1.15 N/A N/A
ENSMUST00000126564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171403 3.118±1.75 2.091±0.34 2.661±0.44 24.257±2.79 2.060±0.76 2.628±0.61 1.261±0.47 1.061±0.31 0.307±0.19 1.634±0.16 0.538±0.17 5.978±2.37 5.839±2.35 1.960±0.20
ENSMUSG00000066324 ENSMUST00000084949 10.252±2.75 7.453±1.21 10.982±0.33 11.827±3.33 8.137±2.90 9.508±2.12 5.876±0.35 9.722±1.38 5.644±0.78 8.607±1.32 13.890±0.90 13.861±4.77 8.946±2.76 7.925±2.62
ENSMUSG00000083228 ENSMUST00000118541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A 0.157±0.02
ENSMUSG00000083232 ENSMUST00000120208 N/A N/A 0.008±0.00 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084360 ENSMUST00000121336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.01
ENSMUSG00000086066 ENSMUST00000130895 N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A
ENSMUST00000156903 N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A 2.158±0.34
ENSMUSG00000087099 ENSMUST00000131675 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.189±0.05

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