C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nebulin-related anchoring protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049134 Nrap 10090 - 19:56320035-56390037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040711 Nrap-002 56320101-56390035 protein_coding
  ENSMUST00000073536 Nrap-001 56320041-56390037 protein_coding
  ENSMUST00000095947 Nrap-003 56320126-56390035 protein_coding
  ENSMUST00000166203 Nrap-006 56320195-56389877 protein_coding
  ENSMUST00000167239 Nrap-004 56320035-56390011 protein_coding
  ENSMUST00000169099 Nrap-005 56320192-56379865 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLungMuscleOvaryPlacentaTestisENSMUST00000040711ENSMUST00000073536ENSMUST00000095947ENSMUST00000166203ENSMUST00000167239ENSMUST00000169099
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000040711 N/A N/A 0.042±0.00 N/A 12.270±1.58 44.846±7.27 1.319±0.82 72.782±19.49 N/A N/A N/A
ENSMUST00000073536 N/A N/A N/A N/A 7.932±4.65 N/A 1.128±0.00 148.747±17.56 N/A N/A N/A
ENSMUST00000095947 0.087±0.04 N/A 0.046±0.00 0.076±0.00 0.067±0.01 13.802±4.68 0.381±0.00 N/A 0.316±0.09 N/A 0.047±0.02
ENSMUST00000166203 0.032±0.00 0.022±0.01 N/A 0.191±0.00 7.141±4.98 N/A 1.556±0.05 N/A 0.315±0.13 0.075±0.00 0.021±0.01
ENSMUST00000167239 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.039±0.02
ENSMUST00000169099 0.036±0.00 N/A N/A N/A 0.089±0.01 N/A 0.292±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0002 CGP 19:55741810-56320822
CIL_0006OW CIL_0006OW_0002 CGP 19:56287137-56390037
CIL_0002GC CIL_0002GC_0002 CGP 19:56320035-56442344

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005916 IDA fascia adherens
GO:0005927 IDA muscle tendon junction
GO:0008270 IEA zinc ion binding
GO:0017166 IPI vinculin binding
GO:0030016 IDA myofibril
GO:0030036 TAS actin cytoskeleton organization
GO:0051371 IDA muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009341 NRAP nebulin-related anchoring protein protein_coding Danio_rerio
ENSG00000197893 NRAP nebulin-related anchoring protein protein_coding Homo_sapiens

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