C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nebulin-related anchoring protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040711 Nrap-002 ENSMUSG00000049134 10090 - 19:56320101-56390035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLungMuscleENSMUST00000040711
Transcript ID Bladder Breast Heart Lung Muscle
ENSMUST00000040711 0.042±0.00 12.270±1.58 44.846±7.27 1.319±0.82 72.782±19.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0002 CGP 19:55741810-56320822
CIL_0006OW CIL_0006OW_0002 CGP 19:56287137-56390037
CIL_0002GC CIL_0002GC_0002 CGP 19:56320035-56442344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005916 IDA fascia adherens
GO:0005927 IDA muscle tendon junction
GO:0008270 IEA zinc ion binding
GO:0017166 IPI vinculin binding
GO:0030016 IDA myofibril
GO:0030036 TAS actin cytoskeleton organization
GO:0051371 IDA muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359988 NRAP-001 protein_coding Homo_sapiens 0 4307
ENST00000360478 NRAP-201 protein_coding Homo_sapiens 0 5240
ENST00000369358 NRAP-202 protein_coding Homo_sapiens 0 4300
ENST00000369360 NRAP-003 protein_coding Homo_sapiens 0 5140

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