C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated protein 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049571 9330101J02Rik 10090 - 7:139638778-139683817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129990 9330101J02Rik-001 139638778-139683817 protein_coding
  ENSMUST00000130453 9330101J02Rik-006 139675967-139683817 protein_coding
  ENSMUST00000138129 9330101J02Rik-002 139678270-139683817 retained_intron
  ENSMUST00000140820 9330101J02Rik-003 139638778-139683817 nonsense_mediated_decay
  ENSMUST00000155075 9330101J02Rik-005 139638778-139661107 nonsense_mediated_decay
  ENSMUST00000156116 9330101J02Rik-004 139645708-139683817 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129990ENSMUST00000130453ENSMUST00000138129ENSMUST00000140820ENSMUST00000155075ENSMUST00000156116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129990 0.066±0.00 N/A N/A 0.181±0.00 0.046±0.01 N/A N/A 0.042±0.01 0.008±0.00 0.674±0.18 0.016±0.00 1.276±0.71 N/A 6.107±2.32
ENSMUST00000130453 0.100±0.00 N/A N/A N/A 0.140±0.02 N/A 0.192±0.00 N/A 0.013±0.00 N/A 0.059±0.00 N/A 0.128±0.01 N/A
ENSMUST00000138129 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.045±0.00 N/A N/A N/A N/A 0.005±0.00 N/A
ENSMUST00000140820 N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155075 N/A 0.091±0.01 N/A 0.564±0.00 0.124±0.04 0.044±0.01 N/A 0.047±0.00 0.014±0.02 0.700±0.00 0.029±0.02 1.098±0.12 0.024±0.02 10.785±0.00
ENSMUST00000156116 0.076±0.00 0.074±0.00 0.016±0.00 0.131±0.00 0.058±0.00 0.037±0.02 0.034±0.00 0.061±0.02 0.005±0.00 N/A N/A N/A 0.024±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BC CIL_0000BC_0002 CGP 7:139638778-139878088

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086355 CFAP46 cilia and flagella associated protein 46 protein_coding Danio_rerio
ENSG00000171811 CFAP46 cilia and flagella associated protein 46 protein_coding Homo_sapiens

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