C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000BC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171811-ENSG00000197177 CGP 9606 10:132808392-133131675
GeneTranscriptPositionBiotype
ENSG00000171811 (CFAP46)
cilia and flagella associated protein 46 		ENST00000368585 (CFAP46-008) 132929185-132942823 protein_coding
ENST00000368586 (CFAP46-001) 132808392-132942585 protein_coding
ENST00000417862 (CFAP46-004) 132872528-132876908 retained_intron
ENST00000448925 (CFAP46-002) 132832616-132835353 protein_coding
ENST00000466834 (CFAP46-005) 132908348-132910096 retained_intron
ENST00000475340 (CFAP46-009) 132937115-132942543 retained_intron
ENST00000476633 (CFAP46-007) 132834682-132837077 retained_intron
ENST00000486104 (CFAP46-006) 132898517-132916682 retained_intron
ENSG00000197177 (GPR123)
G protein-coupled receptor 123 		ENST00000392606 (GPR123-002) 133102246-133131428 protein_coding
ENST00000392607 (GPR123-003) 133087905-133131675 protein_coding
ENST00000607359 (GPR123-004) 133070929-133131675 protein_coding
ENSG00000224758 (LINC01167)
long intergenic non-protein coding RNA 1167 		ENST00000423232 (LINC01167-001) 132961340-132962237 lincRNA
ENSG00000232903 (LINC01166)
long intergenic non-protein coding RNA 1166 		ENST00000443633 (LINC01166-001) 132943967-132965289 lincRNA
ENSG00000240707 (LINC01168)
long intergenic non-protein coding RNA 1168 		ENST00000461291 (LINC01168-001) 132965534-132976354 lincRNA
ENSG00000256925 (GPR123-AS1)
GPR123 antisense RNA 1 		ENST00000366099 (GPR123-AS1-002) 133085256-133088491 antisense
ENST00000444433 (GPR123-AS1-001) 133083073-133086697 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0000BC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049571-ENSMUSG00000025475 CGP 10090 7:139638778-139878088
GeneTranscriptPositionBiotype
ENSMUSG00000025475 (Gpr123)
G protein-coupled receptor 123 		ENSMUST00000026548 (Gpr123-001) 139834174-139878088 protein_coding
ENSMUST00000129454 (Gpr123-002) 139834962-139841204 retained_intron
ENSMUST00000137584 (Gpr123-003) 139834365-139845642 processed_transcript
ENSMUSG00000049571 (9330101J02Rik)
cilia and flagella associated protein 46 		ENSMUST00000129990 (9330101J02Rik-001) 139638778-139683817 protein_coding
ENSMUST00000130453 (9330101J02Rik-006) 139675967-139683817 protein_coding
ENSMUST00000138129 (9330101J02Rik-002) 139678270-139683817 retained_intron
ENSMUST00000140820 (9330101J02Rik-003) 139638778-139683817 nonsense_mediated_decay
ENSMUST00000155075 (9330101J02Rik-005) 139638778-139661107 nonsense_mediated_decay
ENSMUST00000156116 (9330101J02Rik-004) 139645708-139683817 retained_intron
ENSMUSG00000056777 (Rpl21-ps13)
ribosomal protein L21-ps13 		ENSMUST00000072532 (Rpl21-ps13-201) 139719399-139719881 processed_pseudogene
ENSMUSG00000083626 (Gm4459)
predicted gene 4459 		ENSMUST00000118750 (Gm4459-001) 139659688-139660155 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BC_0001ENSG00000171811ENST00000368585ENST00000368586ENST00000417862ENST00000448925ENST00000466834ENST00000475340ENST00000476633ENST00000486104ENSG00000197177ENST00000392606ENST00000392607ENST00000607359ENSG00000224758ENST00000423232ENSG00000232903ENST00000443633ENSG00000240707ENST00000461291ENSG00000256925ENST00000366099ENST00000444433CIL_0000BC_0002ENSMUSG00000025475ENSMUST00000026548ENSMUST00000129454ENSMUST00000137584ENSMUSG00000049571ENSMUST00000129990ENSMUST00000130453ENSMUST00000138129ENSMUST00000140820ENSMUST00000155075ENSMUST00000156116ENSMUSG00000056777ENSMUST00000072532ENSMUSG00000083626ENSMUST00000118750
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BC_0001ENSG00000171811ENST00000368585ENST00000368586ENST00000448925ENST00000475340ENST00000486104ENSG00000197177ENST00000392606ENST00000392607ENST00000607359ENSG00000224758ENST00000423232ENSG00000232903ENST00000443633ENSG00000240707ENST00000461291ENSG00000256925ENST00000366099ENST00000444433CIL_0000BC_0002ENSMUSG00000025475ENSMUST00000026548ENSMUST00000129454ENSMUSG00000049571ENSMUST00000129990ENSMUST00000130453ENSMUST00000138129ENSMUST00000140820ENSMUST00000155075ENSMUST00000156116ENSMUSG00000056777ENSMUST00000072532ENSMUSG00000083626ENSMUST00000118750
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171811 ENST00000368585 N/A 0.067±0.00 N/A N/A 0.113±0.00 0.037±0.00 N/A N/A 0.093±0.00 0.845±0.00 N/A N/A N/A N/A
ENST00000368586 0.005±0.00 0.023±0.00 N/A 0.081±0.00 0.029±0.00 N/A 0.015±0.00 N/A 0.016±0.00 0.813±0.00 N/A 0.357±0.49 0.007±0.00 8.349±4.18
ENST00000417862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448925 N/A N/A N/A N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000466834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475340 N/A 0.071±0.00 N/A 0.407±0.00 N/A N/A 0.075±0.00 0.579±0.16 0.059±0.00 N/A N/A 0.074±0.00 0.090±0.02 N/A
ENST00000476633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A
ENSG00000197177 ENST00000392606 0.007±0.00 0.104±0.00 N/A 5.777±4.72 N/A 0.023±0.00 0.023±0.02 0.062±0.05 N/A 0.060±0.00 N/A N/A N/A N/A
ENST00000392607 N/A 0.181±0.00 0.061±0.00 2.604±2.06 N/A N/A N/A 0.129±0.00 0.261±0.00 N/A 0.023±0.00 0.445±0.00 N/A 0.155±0.03
ENST00000607359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A
ENSG00000224758 ENST00000423232 N/A N/A N/A 0.101±0.00 0.048±0.00 N/A N/A 0.092±0.00 N/A N/A N/A 0.080±0.02 N/A 0.134±0.09
ENSG00000232903 ENST00000443633 N/A N/A N/A 0.303±0.06 N/A 0.007±0.00 N/A 0.088±0.00 0.027±0.00 0.085±0.00 N/A 0.023±0.01 N/A 0.465±0.30
ENSG00000240707 ENST00000461291 N/A N/A N/A 0.056±0.01 N/A 0.020±0.00 N/A N/A 0.014±0.00 0.083±0.01 N/A 0.018±0.00 N/A 0.347±0.26
ENSG00000256925 ENST00000366099 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A
ENST00000444433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025475 ENSMUST00000026548 0.023±0.01 0.789±0.26 0.719±0.12 4.059±2.47 0.017±0.01 0.090±0.03 0.015±0.01 0.060±0.02 0.005±0.00 0.045±0.00 0.011±0.00 0.293±0.08 0.021±0.01 0.007±0.00
ENSMUST00000129454 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.042±0.00 N/A
ENSMUST00000137584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049571 ENSMUST00000129990 0.066±0.00 N/A N/A 0.181±0.00 0.046±0.01 N/A N/A 0.042±0.01 0.008±0.00 0.674±0.18 0.016±0.00 1.276±0.71 N/A 6.107±2.32
ENSMUST00000130453 0.100±0.00 N/A N/A N/A 0.140±0.02 N/A 0.192±0.00 N/A 0.013±0.00 N/A 0.059±0.00 N/A 0.128±0.01 N/A
ENSMUST00000138129 N/A N/A N/A N/A N/A N/A 0.030±0.00 0.045±0.00 N/A N/A N/A N/A 0.005±0.00 N/A
ENSMUST00000140820 N/A N/A N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155075 N/A 0.091±0.01 N/A 0.564±0.00 0.124±0.04 0.044±0.01 N/A 0.047±0.00 0.014±0.02 0.700±0.00 0.029±0.02 1.098±0.12 0.024±0.02 10.785±0.00
ENSMUST00000156116 0.076±0.00 0.074±0.00 0.016±0.00 0.131±0.00 0.058±0.00 0.037±0.02 0.034±0.00 0.061±0.02 0.005±0.00 N/A N/A N/A 0.024±0.00 N/A
ENSMUSG00000056777 ENSMUST00000072532 0.126±0.00 N/A 0.044±0.00 0.092±0.09 N/A N/A N/A N/A 0.018±0.00 N/A 0.102±0.00 0.260±0.00 0.124±0.10 0.372±0.37
ENSMUSG00000083626 ENSMUST00000118750 5.827±4.17 2.935±1.62 3.993±3.32 7.888±0.61 6.812±1.45 3.640±2.16 8.784±1.02 4.540±1.10 6.498±7.82 1.717±0.53 1.305±0.46 7.689±4.96 0.658±0.24 2.932±1.02

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