C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050944 Efcab5 10090 - 11:77089915-77188968 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108400 Efcab5-001 77089915-77188968 protein_coding
  ENSMUST00000130901 Efcab5-004 77090185-77151925 protein_coding
  ENSMUST00000148985 Efcab5-002 77102720-77137793 retained_intron
  ENSMUST00000151731 Efcab5-005 77089944-77103062 retained_intron
  ENSMUST00000155085 Efcab5-003 77151818-77168916 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108400ENSMUST00000130901ENSMUST00000148985ENSMUST00000151731ENSMUST00000155085
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108400 N/A N/A N/A 0.190±0.00 0.072±0.04 0.228±0.14 0.101±0.02 0.077±0.02 0.059±0.01 0.074±0.02 0.017±0.00 0.095±0.00 0.024±0.00 21.394±3.89
ENSMUST00000130901 N/A 0.104±0.05 N/A 0.128±0.00 N/A 0.084±0.00 0.057±0.00 0.136±0.12 0.063±0.04 0.061±0.00 0.081±0.02 0.097±0.03 0.094±0.02 10.331±2.13
ENSMUST00000148985 0.048±0.01 0.140±0.05 0.027±0.01 0.286±0.10 0.112±0.05 0.223±0.07 0.073±0.03 0.063±0.02 0.054±0.02 0.141±0.03 0.047±0.02 0.080±0.03 0.038±0.00 12.776±1.51
ENSMUST00000151731 0.105±0.00 N/A N/A N/A N/A 0.189±0.00 0.200±0.00 N/A 0.078±0.00 0.252±0.00 0.048±0.00 0.313±0.05 N/A N/A
ENSMUST00000155085 N/A N/A N/A N/A 1.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000176927 EFCAB5 EF-hand calcium binding domain 5 protein_coding Homo_sapiens

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