C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kruppel-like factor 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052040 Klf13 10090 - 7:63886347-63938915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063694 Klf13-001 63886347-63938915 protein_coding
  ENSMUST00000183817 Klf13-002 63891400-63924870 protein_coding
  ENSMUST00000183907 Klf13-004 63935399-63936332 retained_intron
  ENSMUST00000185175 Klf13-003 63891383-63936301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063694 16.412±1.48 24.227±2.15 5.212±1.39 6.027±1.13 29.353±9.39 19.216±0.98 6.545±2.14 11.009±0.61 5.459±2.48 37.544±4.27 1.526±0.40 18.421±5.63 5.802±1.40 0.681±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ON CIL_0006ON_0002 CGP 7:63444751-63938915
CIL_00081G CIL_00081G_0002 VISTA 7:63656077-64260826

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0008285 IMP negative regulation of cell proliferation
GO:0045647 IMP negative regulation of erythrocyte differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061368 klf13 Kruppel-like factor 13 protein_coding Danio_rerio
ENSG00000169926 KLF13 Kruppel-like factor 13 protein_coding Homo_sapiens

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