C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hemoglobin Y, beta-like embryonic chain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052187 Hbb-y 10090 - 7:103851745-103853240 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033229 Hbb-y-001 103851745-103853240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLungOvaryPlacentaTestisENSMUST00000033229
Transcript ID Bladder Brain Heart Lung Ovary Placenta Testis
ENSMUST00000033229 0.167±0.05 141.923±24.18 0.086±0.03 0.200±0.04 0.368±0.00 1225.345±1471.68 0.151±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0005 CGP 7:103841636-103853240
CIL_0004CP CIL_0004CP_0002 CGP 7:103851745-103882241

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0031721 IEA hemoglobin alpha binding
GO:0051291 IEA protein heterooligomerization
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038147 hbbe3 hemoglobin beta embryonic-3 protein_coding Danio_rerio
ENSDARG00000045143 hbbe2 hemoglobin beta embryonic-2 protein_coding Danio_rerio
ENSDARG00000069734 zgc:92880 zgc:92880 protein_coding Danio_rerio
ENSDARG00000087390 si:ch211-5k11.12 si:ch211-5k11.12 protein_coding Danio_rerio
ENSDARG00000089087 ba1 ba1 globin protein_coding Danio_rerio
ENSDARG00000089963 hbbe1.1 hemoglobin beta embryonic-1.1 protein_coding Danio_rerio
ENSDARG00000090689 hbbe1.2 hemoglobin beta embryonic-1.2 protein_coding Danio_rerio
ENSDARG00000097238 ba1l ba1 globin, like protein_coding Danio_rerio
ENSG00000213931 HBE1 hemoglobin, epsilon 1 protein_coding Homo_sapiens

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