C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ba1 globin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000089087 ba1 7955 - 3:55955117-55955982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000101713 ba1-001 55955117-55955982 protein_coding
  ENSDART00000142014 ba1-003 55955119-55955760 retained_intron
  ENSDART00000145522 ba1-002 55955117-55955929 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101713ENSDART00000142014
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101713 40.915±32.60 1449.040±501.55 156.826±0.00 22.489±0.00 161.257±0.00
ENSDART00000142014 24.067±23.79 1467.369±1020.99 N/A 40.374±0.00 194.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R8 CIL_0003R8_0001 CGP 3:55955117-55966546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IDA response to hypoxia
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0006810 IEA transport
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196565 HBG2 hemoglobin, gamma G protein_coding Homo_sapiens
ENSG00000213931 HBE1 hemoglobin, epsilon 1 protein_coding Homo_sapiens
ENSG00000213934 HBG1 hemoglobin, gamma A protein_coding Homo_sapiens
ENSG00000223609 HBD hemoglobin, delta protein_coding Homo_sapiens
ENSG00000244734 HBB hemoglobin, beta protein_coding Homo_sapiens
ENSMUSG00000052187 Hbb-y hemoglobin Y, beta-like embryonic chain protein_coding Mus_musculus
ENSMUSG00000052217 Hbb-bh1 hemoglobin Z, beta-like embryonic chain protein_coding Mus_musculus
ENSMUSG00000052305 Hbb-bs hemoglobin, beta adult s chain protein_coding Mus_musculus
ENSMUSG00000073940 Hbb-bt hemoglobin, beta adult t chain protein_coding Mus_musculus
ENSMUSG00000078621 Hbb-bh2 hemoglobin beta, bh2 protein_coding Mus_musculus

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