C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 44
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052331 Ankrd44 10090 - 1:54645340-54926387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044359 Ankrd44-201 54645342-54926387 protein_coding
  ENSMUST00000177679 Ankrd44-008 54766792-54884711 protein_coding
  ENSMUST00000177704 Ankrd44-007 54654911-54690947 retained_intron
  ENSMUST00000177919 Ankrd44-010 54743299-54766423 retained_intron
  ENSMUST00000178156 Ankrd44-012 54649097-54657687 protein_coding
  ENSMUST00000178226 Ankrd44-004 54651669-54763728 protein_coding
  ENSMUST00000178685 Ankrd44-006 54728987-54735644 retained_intron
  ENSMUST00000178905 Ankrd44-009 54762368-54813443 processed_transcript
  ENSMUST00000178935 Ankrd44-003 54735302-54926354 retained_intron
  ENSMUST00000179030 Ankrd44-001 54645340-54926387 protein_coding
  ENSMUST00000179242 Ankrd44-011 54667213-54723076 retained_intron
  ENSMUST00000179398 Ankrd44-013 54722568-54724423 retained_intron
  ENSMUST00000180189 Ankrd44-005 54760569-54768827 processed_transcript
  ENSMUST00000180327 Ankrd44-002 54760887-54926387 retained_intron
  ENSMUST00000189563 Ankrd44-014 54645340-54648613 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044359ENSMUST00000177919ENSMUST00000178226ENSMUST00000178935ENSMUST00000179030ENSMUST00000180327ENSMUST00000189563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044359 N/A N/A N/A 2.500±0.47 N/A N/A N/A N/A N/A N/A N/A 0.578±0.06 N/A N/A
ENSMUST00000177919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.939±0.07 N/A N/A
ENSMUST00000178226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.442±1.57
ENSMUST00000178935 N/A 1.827±0.44 N/A N/A 4.693±0.47 1.212±0.22 N/A N/A 0.404±0.00 N/A N/A 1.787±0.00 N/A N/A
ENSMUST00000179030 5.960±0.64 1.244±0.33 4.742±0.44 3.727±0.00 8.340±1.30 2.679±1.07 1.290±0.42 3.221±0.48 0.975±0.51 21.296±1.75 0.696±0.36 2.745±1.18 1.356±0.45 0.573±0.16
ENSMUST00000180327 N/A 0.874±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189563 N/A 0.899±0.12 6.392±0.61 5.951±4.10 5.880±1.52 1.874±0.22 1.160±0.24 1.864±0.32 1.222±0.60 13.385±0.37 0.682±0.29 1.125±0.38 1.133±0.71 1.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KE CIL_0002KE_0002 CGP 1:54472994-54926387
CIL_0007X7 CIL_0007X7_0002 VISTA 1:54604981-55208576
CIL_00042O CIL_00042O_0003 CGP 1:54645340-55027481

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026028 ankrd44 ankyrin repeat domain 44 protein_coding Danio_rerio
ENSG00000065413 ANKRD44 ankyrin repeat domain 44 protein_coding Homo_sapiens

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