C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox D3, opposite strand 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052371 Hoxd3os1 10090 - 2:74703248-74716130 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000132326 Hoxd3os1-004 74703248-74712054 antisense
  ENSMUST00000139005 Hoxd3os1-002 74713126-74716130 antisense
  ENSMUST00000145799 Hoxd3os1-001 74710193-74715996 antisense
  ENSMUST00000156342 Hoxd3os1-003 74710043-74712526 antisense

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMuscleTestisENSMUST00000132326ENSMUST00000139005ENSMUST00000145799ENSMUST00000156342
Transcript ID Liver Lung Muscle Testis
ENSMUST00000132326 0.161±0.04 N/A 3.162±1.20 N/A
ENSMUST00000139005 N/A N/A N/A 30.933±14.70
ENSMUST00000145799 N/A N/A N/A 45.780±4.06
ENSMUST00000156342 N/A 0.266±0.00 1.705±0.33 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_00090A CIL_00090A_0002 VISTA 2:74189927-74791300
CIL_0008JZ CIL_0008JZ_0002 VISTA 2:74350860-74952235
CIL_00017L CIL_00017L_0002 CGP 2:74697727-74707933

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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