C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate-CoA ligase, GDP-forming, alpha subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052738 Suclg1 10090 + 6:73248382-73276911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064740 Suclg1-001 73248382-73276911 protein_coding
  ENSMUST00000123159 Suclg1-003 73248652-73264273 nonsense_mediated_decay
  ENSMUST00000127660 Suclg1-002 73248668-73263051 retained_intron
  ENSMUST00000173366 Suclg1-004 73248661-73257580 processed_transcript
  ENSMUST00000173409 Suclg1-005 73260360-73264269 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064740ENSMUST00000123159ENSMUST00000173409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064740 61.642±11.70 27.391±5.49 58.402±18.51 25.665±7.88 47.688±17.03 80.145±6.09 119.156±31.12 134.057±13.02 75.815±19.58 34.067±3.13 92.062±14.55 20.298±4.06 59.895±54.83 56.702±25.63
ENSMUST00000123159 N/A 20.758±4.17 N/A N/A 22.051±0.00 N/A N/A N/A N/A N/A N/A 9.077±0.00 N/A N/A
ENSMUST00000173409 53.385±0.00 14.180±0.00 N/A N/A 19.152±0.00 N/A N/A N/A N/A N/A N/A 28.786±9.23 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003878 IEA ATP citrate synthase activity
GO:0004775 IEA succinate-CoA ligase (ADP-forming) activity
GO:0004776 IEA succinate-CoA ligase (GDP-forming) activity
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006099 IEA tricarboxylic acid cycle
GO:0006104 IEA succinyl-CoA metabolic process
GO:0006105 IEA succinate metabolic process
GO:0019003 IEA GDP binding
GO:0043234 IEA protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045244 IEA succinate-CoA ligase complex (GDP-forming)
GO:0046982 IEA protein heterodimerization activity
GO:0048037 IEA cofactor binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052712 suclg1 succinate-CoA ligase, GDP-forming, alpha subunit protein_coding Danio_rerio
ENSG00000163541 SUCLG1 succinate-CoA ligase, alpha subunit protein_coding Homo_sapiens

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